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    GJA1 gap junction protein alpha 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714344, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GJA1provided by VGNC
    Official Full Name
    gap junction protein alpha 1provided by VGNC
    Primary source
    VGNC:VGNC:73055
    Locus tag
    EGK_15392
    See related
    Ensembl:ENSMMUG00000005225
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See GJA1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (24941961..24960480)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (146333019..146351594, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene protein BTG1 pseudogene Neighboring gene non-histone chromosomal protein HMG-17 pseudogene Neighboring gene U4 spliceosomal RNA Neighboring gene U4 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in heart development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of connexin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gap junction alpha-1 protein
    Names
    gap junction protein, alpha 1, 43kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261067.1 → NP_001247996.1  gap junction alpha-1 protein

      See identical proteins and their annotated locations for NP_001247996.1

      Status: PROVISIONAL

      Source sequence(s)
      JV046753
      UniProtKB/TrEMBL
      A0A8J8Y316, F7C314, G7MQM0
      Conserved Domains (2) summary
      pfam00029
      Location:3 → 233
      Connexin
      pfam03508
      Location:293 → 312
      Connexin43; Gap junction alpha-1 protein (Cx43)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      24941961..24960480
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015137308.2 → XP_014992794.1  gap junction alpha-1 protein isoform X1

      UniProtKB/TrEMBL
      A0A8J8Y316, F7C314, G7MQM0
      Related
      ENSMMUP00000006915.2, ENSMMUT00000007357.4
      Conserved Domains (2) summary
      pfam00029
      Location:3 → 233
      Connexin
      pfam03508
      Location:293 → 312
      Connexin43; Gap junction alpha-1 protein (Cx43)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials