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    CLPP caseinolytic mitochondrial matrix peptidase proteolytic subunit [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699593, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CLPPprovided by VGNC
    Official Full Name
    caseinolytic mitochondrial matrix peptidase proteolytic subunitprovided by VGNC
    Primary source
    VGNC:VGNC:71263
    See related
    Ensembl:ENSMMUG00000028914
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CLPP in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (6293214..6302362)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (6557306..6566832)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase bubblegum family member 2 Neighboring gene uncharacterized LOC106994618 Neighboring gene uncharacterized LOC701983 Neighboring gene MLLT1 super elongation complex subunit Neighboring gene alkaline ceramidase 1 Neighboring gene uncharacterized LOC114674142 Neighboring gene alkB homolog 7 Neighboring gene general transcription factor IIF subunit 1 Neighboring gene persephin Neighboring gene microRNA mir-6790

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP-dependent peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein quality control for misfolded or incompletely synthesized proteins IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of endopeptidase Clp complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: ATP-dependent Clp protease proteolytic subunit, mitochondrial
    Names
    ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog
    putative ATP-dependent Clp protease proteolytic subunit, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      6293214..6302362
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028839865.1 → XP_028695698.1  LOW QUALITY PROTEIN: ATP-dependent Clp protease proteolytic subunit, mitochondrial

      UniProtKB/TrEMBL
      F6YQ20
      Related
      ENSMMUP00000031933.3, ENSMMUT00000038852.3
      Conserved Domains (1) summary
      PRK00277
      Location:55 → 250
      clpP; ATP-dependent Clp protease proteolytic subunit; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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