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    ACADS acyl-CoA dehydrogenase short chain [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698196, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ACADSprovided by VGNC
    Official Full Name
    acyl-CoA dehydrogenase short chainprovided by VGNC
    Primary source
    VGNC:VGNC:81342
    Locus tag
    EGK_04272
    See related
    Ensembl:ENSMMUG00000020648
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ACADS in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (120531458..120544525)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (120978987..120992073)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107001052 Neighboring gene unc-119 lipid binding chaperone B Neighboring gene signal peptide peptidase like 3 Neighboring gene chloride intracellular channel protein 1 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in butyrate catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fatty acid beta-oxidation using acyl-CoA dehydrogenase IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    short-chain specific acyl-CoA dehydrogenase, mitochondrial
    Names
    acyl-CoA dehydrogenase, C-2 to C-3 short chain
    acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain
    NP_001247750.1
    XP_015008405.1
    XP_028684663.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260821.2 → NP_001247750.1  short-chain specific acyl-CoA dehydrogenase, mitochondrial

      See identical proteins and their annotated locations for NP_001247750.1

      Status: PROVISIONAL

      Source sequence(s)
      JU475453
      UniProtKB/TrEMBL
      A0A8J8XRE8, F7BL23, G7N5Z8, H9ESN4
      Related
      ENSMMUP00000027174.3, ENSMMUT00000029046.4
      Conserved Domains (2) summary
      cd01158
      Location:36 → 408
      SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases
      COG1960
      Location:33 → 412
      CaiA; Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      120531458..120544525
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015152919.2 → XP_015008405.1  short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X2

      UniProtKB/TrEMBL
      F7BL23
      Conserved Domains (2) summary
      cd01158
      Location:36 → 404
      SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases
      COG1960
      Location:33 → 408
      CaiA; Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]

    2. XM_028828830.1 → XP_028684663.1  short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1

      UniProtKB/TrEMBL
      F6TRA8
      Related
      ENSMMUP00000038518.3, ENSMMUT00000045486.3
      Conserved Domains (1) summary
      cd01158
      Location:1 → 335
      SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases

    RNA

    1. XR_003720443.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials