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    GSDMD gasdermin D [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697137, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GSDMDprovided by VGNC
    Official Full Name
    gasdermin Dprovided by VGNC
    Primary source
    VGNC:VGNC:73232
    See related
    Ensembl:ENSMMUG00000001633
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    GSDMDC1
    Orthologs
    human mouse all
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    Genomic context

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    See GSDMD in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (143820127..143828700)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (142813061..142818543)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene MAF bZIP transcription factor A Neighboring gene zinc finger CCCH-type containing 3 Neighboring gene maestro heat like repeat family member 6 Neighboring gene nicotinate phosphoribosyltransferase Neighboring gene eukaryotic translation elongation factor 1 delta

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-4,5-bisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol-4-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylserine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in defense response to bacterium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pyroptotic inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of NLRP3 inflammasome complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gasdermin-D
    Names
    gasdermin domain containing 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      143820127..143828700
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015146130.2 → XP_015001616.2  gasdermin-D isoform X5

      Conserved Domains (1) summary
      pfam04598
      Location:1 → 339
      Gasdermin; Gasdermin family

    2. XM_015146131.2 → XP_015001617.2  gasdermin-D isoform X3

      UniProtKB/TrEMBL
      F7GS01, G7N087
      Related
      ENSMMUP00000002186.4, ENSMMUT00000002313.4
      Conserved Domains (1) summary
      pfam04598
      Location:4 → 456
      Gasdermin; Gasdermin family

    3. XM_015146132.2 → XP_015001618.2  gasdermin-D isoform X5

      Conserved Domains (1) summary
      pfam04598
      Location:1 → 339
      Gasdermin; Gasdermin family

    4. XM_028853073.1 → XP_028708906.1  gasdermin-D isoform X2

      UniProtKB/TrEMBL
      G7N087
      Conserved Domains (1) summary
      pfam04598
      Location:49 → 472
      Gasdermin; Gasdermin family

    5. XM_028853075.1 → XP_028708908.1  gasdermin-D isoform X4

      Conserved Domains (1) summary
      pfam04598
      Location:49 → 462
      Gasdermin; Gasdermin family

    6. XM_015146129.2 → XP_015001615.2  gasdermin-D isoform X1

      UniProtKB/TrEMBL
      F7AAC4, G7N087
      Related
      ENSMMUP00000031883.3, ENSMMUT00000038803.3
      Conserved Domains (1) summary
      pfam04598
      Location:49 → 501
      Gasdermin; Gasdermin family
    Nucleotide Protein
    Heading Accession and Version

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