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    SNX12 sorting nexin 12 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696408, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SNX12provided by VGNC
    Official Full Name
    sorting nexin 12provided by VGNC
    Primary source
    VGNC:VGNC:77707
    See related
    Ensembl:ENSMMUG00000021906
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SNX12 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (68043380..68059481, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (65787157..65803268, complement)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene suppressor of cytokine signaling 5-like Neighboring gene forkhead box O4 Neighboring gene chromosome X CXorf65 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endocytic recycling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in late endosome to Golgi transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in early endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of retromer complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sorting nexin-12

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193757.3 → NP_001180686.1  sorting nexin-12

      See identical proteins and their annotated locations for NP_001180686.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02003166
      UniProtKB/TrEMBL
      A0A1D5QBG3, F6UBM7
      Related
      ENSMMUP00000045382.1, ENSMMUT00000075011.2
      Conserved Domains (1) summary
      cd07294
      Location:27 → 158
      PX_SNX12; The phosphoinositide binding Phox Homology domain of Sorting Nexin 12

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      68043380..68059481 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001085637.4 → XP_001085637.1  sorting nexin-12 isoform X1

      See identical proteins and their annotated locations for XP_001085637.1

      UniProtKB/TrEMBL
      A0A1D5QBG3, F6UBM7
      Related
      ENSMMUP00000049383.2, ENSMMUT00000072103.2
      Conserved Domains (1) summary
      cd07294
      Location:27 → 158
      PX_SNX12; The phosphoinositide binding Phox Homology domain of Sorting Nexin 12

    2. XM_028841672.1 → XP_028697505.1  sorting nexin-12 isoform X2

      Conserved Domains (1) summary
      cl02563
      Location:27 → 87
      PX_domain; The Phox Homology domain, a phosphoinositide binding module
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials