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    TDRD3 tudor domain containing 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696228, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TDRD3provided by VGNC
    Official Full Name
    tudor domain containing 3provided by VGNC
    Primary source
    VGNC:VGNC:79258
    Locus tag
    EGK_09355
    See related
    Ensembl:ENSMMUG00000007169
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TDRD3 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (39064244..39263326)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (40124462..40328149)

    Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106994292 Neighboring gene TAR DNA-binding protein 43 pseudogene Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC106994293 Neighboring gene selenoprotein K pseudogene Neighboring gene eukaryotic initiation factor 4A-I-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tudor domain-containing protein 3
    Names
    tudor domain-containing protein 3-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041770.1 Reference Mmul_10 Primary Assembly

      Range
      39064244..39263326
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015121154.2 → XP_014976640.1  tudor domain-containing protein 3 isoform X4

      UniProtKB/TrEMBL
      F7HF34, G7NK75
      Conserved Domains (3) summary
      cd14282
      Location:194 → 232
      UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
      pfam08585
      Location:1 → 72
      RMI1_N; RecQ mediated genome instability protein
      cd20413
      Location:556 → 608
      Tudor_TDRD3; Tudor domain found in Tudor domain-containing protein 3 (TDRD3) and similar proteins

    2. XM_028837485.1 → XP_028693318.1  tudor domain-containing protein 3 isoform X3

      UniProtKB/TrEMBL
      F7FJN3, F7HF36
      Related
      ENSMMUP00000036227.3, ENSMMUT00000043216.3
      Conserved Domains (3) summary
      cd14282
      Location:246 → 284
      UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
      pfam08585
      Location:2 → 124
      RMI1_N; RecQ mediated genome instability protein
      cd20413
      Location:608 → 660
      Tudor_TDRD3; Tudor domain found in Tudor domain-containing protein 3 (TDRD3) and similar proteins

    3. XM_028837484.1 → XP_028693317.1  tudor domain-containing protein 3 isoform X2

      UniProtKB/TrEMBL
      F7FJN3
      Conserved Domains (3) summary
      cd14282
      Location:250 → 288
      UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
      cd20413
      Location:612 → 664
      Tudor_TDRD3; Tudor domain found in Tudor domain-containing protein 3 (TDRD3) and similar proteins
      pfam08585
      Location:7 → 128
      RMI1_N; RecQ mediated genome instability protein

    4. XM_015121152.2 → XP_014976638.1  tudor domain-containing protein 3 isoform X4

      UniProtKB/TrEMBL
      F7HF34, G7NK75
      Conserved Domains (3) summary
      cd14282
      Location:194 → 232
      UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
      pfam08585
      Location:1 → 72
      RMI1_N; RecQ mediated genome instability protein
      cd20413
      Location:556 → 608
      Tudor_TDRD3; Tudor domain found in Tudor domain-containing protein 3 (TDRD3) and similar proteins

    5. XM_015121151.2 → XP_014976637.1  tudor domain-containing protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AN96, H9YYG8
      Related
      ENSMMUP00000079310.1, ENSMMUT00000090992.1
      Conserved Domains (3) summary
      cd04508
      Location:652 → 700
      TUDOR; Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to ...
      cd14282
      Location:287 → 325
      UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
      pfam08585
      Location:41 → 162
      RMI1_N; RecQ mediated genome instability protein

    6. XM_015121153.2 → XP_014976639.1  tudor domain-containing protein 3 isoform X4

      UniProtKB/TrEMBL
      F7HF34, G7NK75
      Conserved Domains (3) summary
      cd14282
      Location:194 → 232
      UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
      pfam08585
      Location:1 → 72
      RMI1_N; RecQ mediated genome instability protein
      cd20413
      Location:556 → 608
      Tudor_TDRD3; Tudor domain found in Tudor domain-containing protein 3 (TDRD3) and similar proteins

    RNA

    1. XR_003724278.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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