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    PRKAB1 protein kinase AMP-activated non-catalytic subunit beta 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695737, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PRKAB1provided by VGNC
    Official Full Name
    protein kinase AMP-activated non-catalytic subunit beta 1provided by VGNC
    Primary source
    VGNC:VGNC:76401
    Locus tag
    EGK_04249
    See related
    Ensembl:ENSMMUG00000019860
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PRKAB1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (119431286..119444324)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (119846908..119859944)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 60 Neighboring gene uncharacterized LOC107001043 Neighboring gene uncharacterized LOC107001044 Neighboring gene transmembrane protein 233 Neighboring gene citron rho-interacting serine/threonine kinase Neighboring gene uncharacterized LOC107001045

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of nucleotide-activated protein kinase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    5'-AMP-activated protein kinase subunit beta-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266115.1 → NP_001253044.1  5'-AMP-activated protein kinase subunit beta-1

      See identical proteins and their annotated locations for NP_001253044.1

      Status: PROVISIONAL

      Source sequence(s)
      JV043683
      UniProtKB/TrEMBL
      A0A8J8XAB8, G7N5S7, H9EPL6
      Related
      ENSMMUP00000080646.1, ENSMMUT00000107609.1
      Conserved Domains (2) summary
      smart01010
      Location:181 → 270
      AMPKBI; 5'-AMP-activated protein kinase beta subunit, interation domain
      pfam16561
      Location:78 → 161
      AMPK1_CBM; Glycogen recognition site of AMP-activated protein kinase

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      119431286..119444324
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015152913.2 → XP_015008399.1  5'-AMP-activated protein kinase subunit beta-1 isoform X3

      Conserved Domains (2) summary
      pfam16561
      Location:78 → 161
      AMPK1_CBM; Glycogen recognition site of AMP-activated protein kinase
      cl08426
      Location:181 → 218
      AMPKBI; 5'-AMP-activated protein kinase beta subunit, interaction domain

    2. XM_015152911.2 → XP_015008397.1  5'-AMP-activated protein kinase subunit beta-1 isoform X1

      Conserved Domains (2) summary
      pfam16561
      Location:78 → 161
      AMPK1_CBM; Glycogen recognition site of AMP-activated protein kinase
      cl08426
      Location:181 → 227
      AMPKBI; 5'-AMP-activated protein kinase beta subunit, interaction domain

    3. XM_015152912.2 → XP_015008398.1  5'-AMP-activated protein kinase subunit beta-1 isoform X2

      Conserved Domains (2) summary
      pfam16561
      Location:79 → 161
      AMPK1_CBM; Glycogen recognition site of AMP-activated protein kinase
      cl08426
      Location:181 → 229
      AMPKBI; 5'-AMP-activated protein kinase beta subunit, interaction domain
    Nucleotide Protein
    Heading Accession and Version

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