Pgm2l1 phosphoglucomutase 2-like 1 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Pgm2l1provided by RGD
Official Full Name: phosphoglucomutase 2-like 1provided by RGD
Primary source: RGD:1583226
See related: EnsemblRapid:ENSRNOG00000017079 AllianceGenome:RGD:1583226
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Predicted to enable glucose-1,6-bisphosphate synthase activity. Predicted to be involved in carbohydrate metabolic process. Orthologous to human PGM2L1 (phosphoglucomutase 2 like 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression: Biased expression in Brain (RPKM 399.2), Lung (RPKM 110.7) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 1q32

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	1	NC_086019.1 (163983917..164033027)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	1	NC_051336.1 (154571410..154620901)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	1	NC_005100.4 (165237847..165286980)

Chromosome 1 - NC_086019.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

RH142953 (e-PCR)
- UniSTS:232200

AA963864 (e-PCR)
- UniSTS:248117

AI145292 (e-PCR)
- UniSTS:245415

Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables glucose-1,6-bisphosphate synthase activity	IBA Inferred from Biological aspect of Ancestor more info
enables glucose-1,6-bisphosphate synthase activity	ISO Inferred from Sequence Orthology more info
enables intramolecular phosphotransferase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in carbohydrate metabolic process	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: glucose 1,6-bisphosphate synthase

NP_001102924.1

EC 2.7.1.106

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.