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    TAF7L TATA-box binding protein associated factor 7 like [ Bos taurus (domestic cattle) ]

    Gene ID: 615711, updated on 4-Oct-2024

    Summary

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    Official Symbol
    TAF7Lprovided by VGNC
    Official Full Name
    TATA-box binding protein associated factor 7 likeprovided by VGNC
    Primary source
    VGNC:VGNC:35580
    See related
    BGD:BT20118; Ensembl:ENSBTAG00000001979
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See TAF7L in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (50887740..50906388)

    Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene Bruton tyrosine kinase Neighboring gene microRNA mir-11999 Neighboring gene translocase of inner mitochondrial membrane 8A Neighboring gene dystrophin related protein 2 Neighboring gene centromere protein I Neighboring gene transfer RNA glycine (anticodon CCC)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II general transcription initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA polymerase II preinitiation complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription initiation at RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription factor TFIID complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription initiation factor TFIID subunit 7-like
    Names
    TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      50887740..50906388
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015461563.3 → XP_015317049.1  transcription initiation factor TFIID subunit 7-like isoform X2

      Conserved Domains (1) summary
      pfam04658
      Location:81 → 259
      TAFII55_N; TAFII55 protein conserved region

    2. XM_015461562.3 → XP_015317048.1  transcription initiation factor TFIID subunit 7-like isoform X1

      Conserved Domains (1) summary
      pfam04658
      Location:81 → 259
      TAFII55_N; TAFII55 protein conserved region

    3. XM_002699822.7 → XP_002699868.2  transcription initiation factor TFIID subunit 7-like isoform X3

      See identical proteins and their annotated locations for XP_002699868.2

      UniProtKB/TrEMBL
      A0AAA9T8G6, G3N1E6
      Related
      ENSBTAP00000055687.3, ENSBTAT00000066188.3
      Conserved Domains (1) summary
      pfam04658
      Location:12 → 190
      TAFII55_N; TAFII55 protein conserved region
    Nucleotide Protein Strain
    Heading Accession and Version

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