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    GAL3ST1 galactose-3-O-sulfotransferase 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 611960, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GAL3ST1provided by VGNC
    Official Full Name
    galactose-3-O-sulfotransferase 1provided by VGNC
    Primary source
    VGNC:VGNC:41076
    See related
    Ensembl:ENSCAFG00845020287
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    CST
    Orthologs
    human mouse all
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    Genomic context

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    See GAL3ST1 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 26 NC_051830.1 (24021806..24038366, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 26 NC_006608.4 (23508876..23510937, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 26 NC_049247.1 (24046756..24048817, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 26 NC_049286.1 (23723595..23725656, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 26 NC_049767.1 (23986212..23988273, complement)

    Chromosome 26 - NC_051830.1Genomic Context describing neighboring genes Neighboring gene SEC14-like protein 3 Neighboring gene SEC14-like protein 4 Neighboring gene 40S ribosomal protein S24-like Neighboring gene pescadillo ribosomal biogenesis factor 1 Neighboring gene transcobalamin 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables galactosylceramide sulfotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in galactosylceramide biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in myelination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    galactosylceramide sulfotransferase
    Names
    cerebroside sulfotransferase
    NP_001128598.1
    XP_038292040.1
    XP_038292041.1
    XP_038292042.1
    XP_038292043.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001135126.1 → NP_001128598.1  galactosylceramide sulfotransferase

      See identical proteins and their annotated locations for NP_001128598.1

      Status: PROVISIONAL

      Source sequence(s)
      AB240641
      UniProtKB/TrEMBL
      A1IGX8
      Conserved Domains (1) summary
      pfam06990
      Location:4 → 408
      Gal-3-0_sulfotr; Galactose-3-O-sulfotransferase

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051830.1 Reference ROS_Cfam_1.0

      Range
      24021806..24038366 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038436114.1 → XP_038292042.1  galactosylceramide sulfotransferase isoform X1

      UniProtKB/TrEMBL
      A0A8C0JI58, A0A8C0RQ49, A1IGX9
      Conserved Domains (1) summary
      pfam06990
      Location:4 → 409
      Gal-3-0_sulfotr; Galactose-3-O-sulfotransferase

    2. XM_038436115.1 → XP_038292043.1  galactosylceramide sulfotransferase isoform X2

      UniProtKB/TrEMBL
      A1IGX8
      Conserved Domains (1) summary
      pfam06990
      Location:4 → 408
      Gal-3-0_sulfotr; Galactose-3-O-sulfotransferase

    3. XM_038436112.1 → XP_038292040.1  galactosylceramide sulfotransferase isoform X1

      UniProtKB/TrEMBL
      A0A8C0JI58, A0A8C0RQ49, A1IGX9
      Related
      ENSCAFP00845028356.1, ENSCAFT00845036236.1
      Conserved Domains (1) summary
      pfam06990
      Location:4 → 409
      Gal-3-0_sulfotr; Galactose-3-O-sulfotransferase

    4. XM_038436113.1 → XP_038292041.1  galactosylceramide sulfotransferase isoform X1

      UniProtKB/TrEMBL
      A0A8C0JI58, A0A8C0RQ49, A1IGX9
      Conserved Domains (1) summary
      pfam06990
      Location:4 → 409
      Gal-3-0_sulfotr; Galactose-3-O-sulfotransferase

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049286.1 Alternate UMICH_Zoey_3.1

      Range
      23723595..23725656 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049767.1 Alternate UNSW_CanFamBas_1.0

      Range
      23986212..23988273 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049247.1 Alternate UU_Cfam_GSD_1.0

      Range
      24046756..24048817 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006608.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      23508876..23510937 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials