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    TBL1X transducin beta like 1 X-linked [ Canis lupus familiaris (dog) ]

    Gene ID: 611017, updated on 5-Mar-2024

    Summary

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    Gene symbol
    TBL1X
    Gene description
    transducin beta like 1 X-linked
    See related
    Ensembl:ENSCAFG00845025373
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human all
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    Genomic context

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    See TBL1X in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) X NC_051843.1 (6163215..6377059)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) X NC_006621.4 (6175447..6388129)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) X NC_049260.1 (6181611..6393913)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) X NC_049299.1 (6156927..6369928)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) X NC_049780.1 (6192762..6404790)

    Chromosome X - NC_051843.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102153595 Neighboring gene transcription initiation factor TFIID subunit 9-like Neighboring gene uncharacterized LOC119868149 Neighboring gene uncharacterized LOC119868358 Neighboring gene uncharacterized LOC119868357 Neighboring gene G protein-coupled receptor 143 Neighboring gene shroom family member 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of histone deacetylase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    F-box-like/WD repeat-containing protein TBL1X; LOW QUALITY PROTEIN: F-box-like/WD repeat-containing protein TBL1X
    Names
    transducin beta like 1X-linked

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051843.1 Reference ROS_Cfam_1.0

      Range
      6163215..6377059
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038449363.1 → XP_038305291.1  F-box-like/WD repeat-containing protein TBL1X

      UniProtKB/TrEMBL
      A0A8C0JPC2, A0A8C0MYI5, A0A8C0SMB9, A0A8I3PUV7
      Conserved Domains (3) summary
      cd00200
      Location:176 → 482
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:184 → 231
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:7 → 31
      LisH

    2. XM_038449361.1 → XP_038305289.1  F-box-like/WD repeat-containing protein TBL1X

      UniProtKB/TrEMBL
      A0A8C0JPC2, A0A8C0MYI5, A0A8C0SMB9, A0A8I3PUV7
      Related
      ENSCAFP00845035217.1, ENSCAFT00845044939.1
      Conserved Domains (3) summary
      cd00200
      Location:176 → 482
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:184 → 231
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:7 → 31
      LisH

    3. XM_038449362.1 → XP_038305290.1  F-box-like/WD repeat-containing protein TBL1X

      UniProtKB/TrEMBL
      A0A8C0JPC2, A0A8C0MYI5, A0A8C0SMB9, A0A8I3PUV7
      Conserved Domains (3) summary
      cd00200
      Location:176 → 482
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:184 → 231
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:7 → 31
      LisH

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049299.1 Alternate UMICH_Zoey_3.1

      Range
      6156927..6369928
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038522784.1 → XP_038378712.1  F-box-like/WD repeat-containing protein TBL1X

      Conserved Domains (3) summary
      cd00200
      Location:176 → 482
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:184 → 231
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:7 → 31
      LisH

    2. XM_038522782.1 → XP_038378710.1  F-box-like/WD repeat-containing protein TBL1X

      Conserved Domains (3) summary
      cd00200
      Location:176 → 482
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:184 → 231
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:7 → 31
      LisH

    3. XM_038522783.1 → XP_038378711.1  F-box-like/WD repeat-containing protein TBL1X

      Conserved Domains (3) summary
      cd00200
      Location:176 → 482
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:184 → 231
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:7 → 31
      LisH

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049780.1 Alternate UNSW_CanFamBas_1.0

      Range
      6192762..6404790
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038651290.1 → XP_038507218.1  LOW QUALITY PROTEIN: F-box-like/WD repeat-containing protein TBL1X

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049260.1 Alternate UU_Cfam_GSD_1.0

      Range
      6181611..6393913
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038586785.1 → XP_038442713.1  F-box-like/WD repeat-containing protein TBL1X

      UniProtKB/TrEMBL
      A0A8C0JPC2, A0A8C0MYI5, A0A8C0SMB9, A0A8I3PUV7
      Conserved Domains (3) summary
      cd00200
      Location:176 → 482
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:184 → 231
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:7 → 31
      LisH

    2. XM_038586782.1 → XP_038442710.1  F-box-like/WD repeat-containing protein TBL1X

      UniProtKB/TrEMBL
      A0A8C0JPC2, A0A8C0MYI5, A0A8C0SMB9, A0A8I3PUV7
      Conserved Domains (3) summary
      cd00200
      Location:176 → 482
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:184 → 231
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:7 → 31
      LisH

    3. XM_038586783.1 → XP_038442711.1  F-box-like/WD repeat-containing protein TBL1X

      UniProtKB/TrEMBL
      A0A8C0JPC2, A0A8C0MYI5, A0A8C0SMB9, A0A8I3PUV7
      Conserved Domains (3) summary
      cd00200
      Location:176 → 482
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:184 → 231
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:7 → 31
      LisH

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      6175447..6388129
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014111473.3 → XP_013966948.1  F-box-like/WD repeat-containing protein TBL1X

      UniProtKB/TrEMBL
      A0A8C0JPC2, A0A8C0MYI5, A0A8C0SMB9, A0A8I3PUV7
      Conserved Domains (3) summary
      cd00200
      Location:176 → 482
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:184 → 231
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:7 → 31
      LisH

    2. XM_038464724.1 → XP_038320652.1  F-box-like/WD repeat-containing protein TBL1X

      UniProtKB/TrEMBL
      A0A8C0JPC2, A0A8C0MYI5, A0A8C0SMB9, A0A8I3PUV7
      Conserved Domains (3) summary
      cd00200
      Location:176 → 482
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:184 → 231
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:7 → 31
      LisH

    3. XM_022415863.2 → XP_022271571.1  F-box-like/WD repeat-containing protein TBL1X

      UniProtKB/TrEMBL
      A0A8C0JPC2, A0A8C0MYI5, A0A8C0SMB9, A0A8I3PUV7
      Conserved Domains (3) summary
      cd00200
      Location:176 → 482
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:184 → 231
      7WD40; WD40 repeat [structural motif]
      pfam08513
      Location:7 → 31
      LisH
    Nucleotide Protein
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