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    APMAP adipocyte plasma membrane associated protein [ Canis lupus familiaris (dog) ]

    Gene ID: 608089, updated on 17-Aug-2024

    Summary

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    Official Symbol
    APMAPprovided by VGNC
    Official Full Name
    adipocyte plasma membrane associated proteinprovided by VGNC
    Primary source
    VGNC:VGNC:37990
    See related
    Ensembl:ENSCAFG00845028549
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    C23H20orf3
    Orthologs
    human mouse all
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    Genomic context

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    See APMAP in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 23 NC_051827.1 (1391822..1427020, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 23 NC_006605.4 (1179090..1214161, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 23 NC_049244.1 (1320381..1355442, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 23 NC_049283.1 (1207270..1242280, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 23 NC_049764.1 (1337442..1372453, complement)

    Chromosome 23 - NC_051827.1Genomic Context describing neighboring genes Neighboring gene transcription elongation factor A protein 3-like Neighboring gene U6 spliceosomal RNA Neighboring gene cystatin F Neighboring gene uncharacterized LOC102156733 Neighboring gene 40S ribosomal protein S25-like Neighboring gene acyl-CoA synthetase short chain family member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables strictosidine synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    adipocyte plasma membrane-associated protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051827.1 Reference ROS_Cfam_1.0

      Range
      1391822..1427020 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038431664.1 → XP_038287592.1  adipocyte plasma membrane-associated protein

      UniProtKB/TrEMBL
      A0A8C0K0J8, A0A8C0P4B0, A0A8I3Q5F9, A0A8I3QPI6
      Related
      ENSCAFP00845039495.1, ENSCAFT00845050375.1
      Conserved Domains (2) summary
      COG3386
      Location:72 → 319
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]
      cl22863
      Location:200 → 287
      Str_synth; Strictosidine synthase

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049283.1 Alternate UMICH_Zoey_3.1

      Range
      1207270..1242280 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038507002.1 → XP_038362930.1  adipocyte plasma membrane-associated protein

      Conserved Domains (2) summary
      COG3386
      Location:72 → 319
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]
      cl22863
      Location:200 → 287
      Str_synth; Strictosidine synthase

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049764.1 Alternate UNSW_CanFamBas_1.0

      Range
      1337442..1372453 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038634396.1 → XP_038490324.1  adipocyte plasma membrane-associated protein

      Conserved Domains (2) summary
      COG3386
      Location:72 → 319
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]
      cl22863
      Location:200 → 287
      Str_synth; Strictosidine synthase

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049244.1 Alternate UU_Cfam_GSD_1.0

      Range
      1320381..1355442 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038570217.1 → XP_038426145.1  adipocyte plasma membrane-associated protein

      UniProtKB/TrEMBL
      A0A8C0K0J8, A0A8C0P4B0, A0A8I3Q5F9, A0A8I3QPI6
      Conserved Domains (2) summary
      COG3386
      Location:72 → 319
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]
      cl22863
      Location:200 → 287
      Str_synth; Strictosidine synthase

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006605.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      1179090..1214161 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_844993.6 → XP_850086.2  adipocyte plasma membrane-associated protein

      UniProtKB/TrEMBL
      A0A8C0K0J8, A0A8C0P4B0, A0A8I3Q5F9, A0A8I3QPI6
      Conserved Domains (2) summary
      COG3386
      Location:72 → 319
      YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]
      cl22863
      Location:200 → 287
      Str_synth; Strictosidine synthase
    Nucleotide Protein
    Heading Accession and Version

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