U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    EFHD2 EF-hand domain family member D2 [ Canis lupus familiaris (dog) ]

    Gene ID: 607254, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    EFHD2provided by VGNC
    Official Full Name
    EF-hand domain family member D2provided by VGNC
    Primary source
    VGNC:VGNC:52132
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See EFHD2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 2 NC_051806.1 (82735969..82751654, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 2 NC_006584.4 (78624095..78639764, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 2 NC_049223.1 (81571202..81586815, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 2 NC_049262.1 (79488736..79504399, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 2 NC_049743.1 (80506682..80522239, complement)

    Chromosome 2 - NC_051806.1Genomic Context describing neighboring genes Neighboring gene caspase 9 Neighboring gene chymotrypsin-C Neighboring gene forkhead associated phosphopeptide binding domain 1 Neighboring gene uncharacterized LOC119881418 Neighboring gene uncharacterized LOC111093971

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    EF-hand domain-containing protein D2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051806.1 Reference ROS_Cfam_1.0

      Range
      82735969..82751654 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038660266.1 → XP_038516194.1  EF-hand domain-containing protein D2

      UniProtKB/TrEMBL
      A0A8C0Q0M7
      Conserved Domains (3) summary
      cd00051
      Location:96 → 154
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
      cd15897
      Location:96 → 125
      EFh_PEF; EF-hand motif [structural motif]
      cl25352
      Location:52 → 130
      EFh_PEF; The penta-EF hand (PEF) family

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049262.1 Alternate UMICH_Zoey_3.1

      Range
      79488736..79504399 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038471045.1 → XP_038326973.1  EF-hand domain-containing protein D2

      Conserved Domains (3) summary
      cd00051
      Location:96 → 154
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
      cd15897
      Location:96 → 125
      EFh_PEF; EF-hand motif [structural motif]
      cl25352
      Location:52 → 130
      EFh_PEF; The penta-EF hand (PEF) family

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049743.1 Alternate UNSW_CanFamBas_1.0

      Range
      80506682..80522239 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038596184.1 → XP_038452112.1  EF-hand domain-containing protein D2

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049223.1 Alternate UU_Cfam_GSD_1.0

      Range
      81571202..81586815 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038531919.1 → XP_038387847.1  EF-hand domain-containing protein D2

      UniProtKB/TrEMBL
      A0A8C0Q0M7
      Conserved Domains (3) summary
      cd00051
      Location:96 → 154
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
      cd15897
      Location:96 → 125
      EFh_PEF; EF-hand motif [structural motif]
      cl25352
      Location:52 → 130
      EFh_PEF; The penta-EF hand (PEF) family

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006584.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      78624095..78639764 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038464316.1 → XP_038320244.1  EF-hand domain-containing protein D2

      UniProtKB/TrEMBL
      A0A8C0Q0M7
      Conserved Domains (3) summary
      cd00051
      Location:96 → 154
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
      cd15897
      Location:96 → 125
      EFh_PEF; EF-hand motif [structural motif]
      cl25352
      Location:52 → 130
      EFh_PEF; The penta-EF hand (PEF) family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.