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    f8a1 coagulation factor VIII [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 594919, updated on 4-Nov-2024

    Summary

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    Official Symbol
    f8a1provided by Xenbase
    Official Full Name
    coagulation factor VIIIprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-5866629
    See related
    Ensembl:ENSXETG00000029980 AllianceGenome:Xenbase:XB-GENE-5866629
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    f8a; f8a3; hap40; dxs522e
    Summary
    Orthologous to human F8A1 (coagulation factor VIII associated 1); F8A2 (coagulation factor VIII associated 2); and F8A3 (coagulation factor VIII associated 3). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See f8a1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (114036234..114051250)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (104051056..104066556)

    Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene cold shock domain containing C2 Neighboring gene family with sequence similarity 234 member B Neighboring gene germ cell associated 1 Neighboring gene epithelial membrane protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC147036

    General protein information

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    Preferred Names
    coagulation factor VIII
    Names
    coagulation factor 8-associated (intronic transcript) 3
    coagulation factor VIII associated 1
    coagulation factor VIII-associated (intronic transcript) 1
    coagulation factor VIII-associated 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001078703.1 → NP_001072171.1  coagulation factor VIII

      See identical proteins and their annotated locations for NP_001072171.1

      Status: PROVISIONAL

      Source sequence(s)
      BC122015
      UniProtKB/TrEMBL
      Q0P4L3, Q5BKG4
      Related
      ENSXETP00000063119.3, ENSXETT00000066036.3
      Conserved Domains (2) summary
      cd15832
      Location:27 → 64
      SNAP; TPR repeat [structural motif]
      cl24038
      Location:16 → 188
      SNAP; Soluble N-ethylmaleimide-sensitive factor (NSF) Attachment Protein family

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      114036234..114051250
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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