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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001164325.1 → NP_001157797.1 transient receptor potential cation channel subfamily M member 7 isoform 2
See identical proteins and their annotated locations for NP_001157797.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the coding region, compared to variant 1. This results in a shorter isoform (2), compared to isoform 1.
- Source sequence(s)
-
AL732330
- Consensus CDS
-
CCDS50700.1
- UniProtKB/TrEMBL
- A2AI57, B9EK83
- Related
- ENSMUSP00000028843.6, ENSMUST00000028843.12
- Conserved Domains (3) summary
-
- smart00811
Location:1595 → 1813
- Alpha_kinase; Alpha-kinase family
- pfam00520
Location:879 → 1100
- Ion_trans; Ion transport protein
- pfam16519
Location:1198 → 1249
- TRPM_tetra; Tetramerization domain of TRPM
-
NM_021450.2 → NP_067425.2 transient receptor potential cation channel subfamily M member 7 isoform 1
See identical proteins and their annotated locations for NP_067425.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AL732330
- Consensus CDS
-
CCDS16689.1
- UniProtKB/Swiss-Prot
- A2AI58, Q8C7S7, Q8CE54, Q921Y5, Q923J1, Q925B2, Q9CUT2, Q9JLQ1
- UniProtKB/TrEMBL
-
B9EK83
- Related
- ENSMUSP00000099513.4, ENSMUST00000103224.10
- Conserved Domains (3) summary
-
- smart00811
Location:1596 → 1814
- Alpha_kinase; Alpha-kinase family
- pfam00520
Location:879 → 1100
- Ion_trans; Ion transport protein
- pfam16519
Location:1198 → 1249
- TRPM_tetra; Tetramerization domain of TRPM
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000068.8 Reference GRCm39 C57BL/6J
- Range
-
126633478..126718181 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036162435.1 → XP_036018328.1 transient receptor potential cation channel subfamily M member 7 isoform X1
- UniProtKB/TrEMBL
-
B9EK83
- Conserved Domains (4) summary
-
- TIGR00870
Location:663 → 1113
- trp; transient-receptor-potential calcium channel protein
- cd16971
Location:1519 → 1757
- Alpha_kinase_ChaK1_TRMP7; Alpha-kinase domain of channel kinase 1, also called transient receptor potential cation channel subfamily M member 7
- pfam16519
Location:1135 → 1188
- TRPM_tetra; Tetramerisation domain of TRPM
- pfam18139
Location:47 → 312
- LSDAT_euk; SLOG in TRPM
-
XM_036162436.1 → XP_036018329.1 transient receptor potential cation channel subfamily M member 7 isoform X2
- Conserved Domains (3) summary
-
- TIGR00870
Location:722 → 1172
- trp; transient-receptor-potential calcium channel protein
- pfam16519
Location:1194 → 1247
- TRPM_tetra; Tetramerisation domain of TRPM
- pfam18139
Location:106 → 371
- LSDAT_euk; SLOG in TRPM
RNA
-
XR_001783160.3 RNA Sequence
-
XR_001783159.3 RNA Sequence