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    CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 [ Homo sapiens (human) ]

    Gene ID: 55790, updated on 28-Oct-2024

    Summary

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    Official Symbol
    CSGALNACT1provided by HGNC
    Official Full Name
    chondroitin sulfate N-acetylgalactosaminyltransferase 1provided by HGNC
    Primary source
    HGNC:HGNC:24290
    See related
    Ensembl:ENSG00000147408 MIM:616615; AllianceGenome:HGNC:24290
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ChGn; ChGn-1; SDJLABA; CSGalNAcT-1; beta4GalNAcT
    Summary
    This gene encodes an enzyme that transfers N-acetylglucosamine (GalNAc) to the core tetrasaccharide linker and to elongating chondroitin sulfate chains in proteoglycans. Knockout of the orthologous mouse gene indicates that the protein is necessary for normal cartilage development and aggrecan metabolism. Mutations in this gene are associated with multiple sclerosis progression, and with mild skeletal dysplasia and joint laxity. [provided by RefSeq, Aug 2017]
    Expression
    Broad expression in thyroid (RPKM 21.6), prostate (RPKM 12.2) and 17 other tissues See more
    Orthologs
    mouse all
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    Genomic context

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    See CSGALNACT1 in Genome Data Viewer
    Location:
    8p21.3
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (19404161..19757908, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (19669045..20022919, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (19261672..19615419, complement)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105379306 Neighboring gene SH2 domain containing 4A Neighboring gene ReSE screen-validated silencer GRCh37_chr8:19230007-19230168 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27055 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27056 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:19262972-19263472 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:19263473-19263973 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27057 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr8:19394183-19395382 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr8:19435762-19436961 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:19497293-19497837 Neighboring gene uncharacterized LOC124901900 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr8:19522068-19523267 Neighboring gene uncharacterized LOC124901899 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:19536806-19537406 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27058 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr8:19589033-19590232 Neighboring gene uncharacterized LOC107986920 Neighboring gene MPRA-validated peak6932 silencer Neighboring gene MPRA-validated peak6933 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:19670041-19670619 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18969 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27059 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27060 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18970 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27061 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27062 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27063 Neighboring gene integrator complex subunit 10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    Related articles in PubMed

    1. Glycosylation is a global target for androgen control in prostate cancer cells. Munkley J. Endocr Relat Cancer, 2017 Mar. PMID 28159857
    2. Genetic alterations of chromosome 8 genes in oral cancer. Yong ZW, et al. Sci Rep, 2014 Aug 15. PMID 25123227, Free PMC Article
    3. Genome-wide association study of nicotine dependence in American populations: identification of novel risk loci in both African-Americans and European-Americans. Gelernter J, et al. Biol Psychiatry, 2015 Mar 1. PMID 25555482, Free PMC Article
    4. Comparison of microarray expression profiles between follicular variant of papillary thyroid carcinomas and follicular adenomas of the thyroid. Schulten HJ, et al. BMC Genomics, 2015. PMID 25923053, Free PMC Article
    5. The reconstruction of transcriptional networks reveals critical genes with implications for clinical outcome of multiple myeloma. Agnelli L, et al. Clin Cancer Res, 2011 Dec 1. PMID 21890453

    See all (50) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. CSGALNACT1-congenital disorder of glycosylation: A mild skeletal dysplasia with advanced bone age.
      Title: CSGALNACT1-congenital disorder of glycosylation: A mild skeletal dysplasia with advanced bone age.
    2. In men, patients who had multiple sclerosis (MS) with S126L had a slower disease progression. This cSNP might be associated with the sex differences in clinical course of MS.
      Title: Chondroitin sulfate β-1,4-N-acetylgalactosaminyltransferase-1 (ChGn-1) polymorphism: Association with progression of multiple sclerosis.
    3. CSGalNAcT-1 and Hapln-1 may play important roles in the pathogenesis of Kashin-Beck disease and osteoarthritis.
      Title: Abnormal expression of chondroitin sulphate N-acetylgalactosaminyltransferase 1 and Hapln-1 in cartilage with Kashin-Beck disease and primary osteoarthritis.
    4. CSGalNAcT-1 exhibited higher enzymatic efficiency toward monosulfated trisaccharides substituted at C4 or C6 position of Gal1, and at C6 of Gal2 compared with the unsulfated oligosaccharide.
      Title: Chondroitin sulfate N-acetylgalactosaminyltransferase-1 (CSGalNAcT-1) involved in chondroitin sulfate initiation: Impact of sulfation on activity and specificity.
    5. CSGALNACT1 missense mutations are associated with neuropathies.
      Title: Chondroitin beta-1,4-N-acetylgalactosaminyltransferase-1 missense mutations are associated with neuropathies.
    6. Clinical trial of gene-disease association and gene-environment interaction. (HuGE Navigator)
      Title: Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.
    7. higher expression in the fetal skin than in adult skin
      Title: Comparison between human fetal and adult skin.
    8. Observational study of gene-disease association. (HuGE Navigator)
      Title: The variant rs1867277 in FOXE1 gene confers thyroid cancer susceptibility through the recruitment of USF1/USF2 transcription factors.
    9. plays a role in the initiation and elongation in the synthesis of chondroitin sulfate
      Title: Differential roles of two N-acetylgalactosaminyltransferases, CSGalNAcT-1, and a novel enzyme, CSGalNAcT-2. Initiation and elongation in synthesis of chondroitin sulfate.
    10. These results suggest that this enzyme has N-acetylgalactosaminyltransferase activity in both the elongation and initiation of chondroitin sulfate synthesis.
      Title: Enzymatic synthesis of chondroitin with a novel chondroitin sulfate N-acetylgalactosaminyltransferase that transfers N-acetylgalactosamine to glucuronic acid in initiation and elongation of chondroitin sulfate synthesis.
    Submit: New GeneRIF Correction

    Phenotypes

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    Find tests for this gene in the NIH Genetic Testing Registry (GTR)

    Review eQTL and phenotype association data in this region using PheGenI

    Associated conditions

    Description Tests
    Skeletal dysplasia, mild, with joint laxity and advanced bone age
    MedGen: C5394341 OMIM: 618870 GeneReviews: Not available
    		Compare labs

    EBI GWAS Catalog

    Description
    A genome-wide association study of a sustained pattern of antidepressant response.
    EBI GWAS Catalog
    Common genetic variants associated with cognitive performance identified using the proxy-phenotype method.
    EBI GWAS Catalog

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Clone Names

    • FLJ11264, FLJ13760

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables acetylgalactosaminyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables acetylgalactosaminyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity TAS
    Traceable Author Statement
    more info
    		  
    enables glucuronosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables metal ion binding NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    enables peptidoglycan glycosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in UDP-N-acetylgalactosamine metabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in UDP-glucuronate metabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in cartilage development IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in chondroitin sulfate biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in chondroitin sulfate biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in chondroitin sulfate biosynthetic process TAS
    Traceable Author Statement
    more info
    		  
    involved_in chondroitin sulfate proteoglycan biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in dermatan sulfate proteoglycan biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in endochondral ossification IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in extracellular matrix organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in heparin biosynthetic process NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in proteoglycan biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi cisterna membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in Golgi membrane NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in Golgi membrane TAS
    Traceable Author Statement
    more info
    		  

    General protein information

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    Preferred Names
    chondroitin sulfate N-acetylgalactosaminyltransferase 1
    Names
    beta4GalNAcT-1
    chondroitin beta-1,4-N-acetylgalactosaminyltransferase 1
    chondroitin beta1,4 N-acetylgalactosaminyltransferase
    glucuronylgalactosylproteoglycan 4-beta-N- acetylgalactosaminyltransferase
    NP_001123990.1
    NP_001341404.1
    NP_001341405.1
    NP_001341406.1
    NP_001341409.1
    NP_001341410.1
    NP_001341412.1
    NP_001341413.1
    NP_001341414.1
    NP_001341416.1
    NP_001341417.1
    NP_001341418.1
    NP_001341419.1
    NP_001341420.1
    NP_001341421.1
    NP_001341423.1
    NP_001341424.1
    NP_001341425.1
    NP_001341426.1
    NP_001341427.1
    NP_001341428.1
    NP_060841.5
    XP_006716423.1
    XP_006716426.1
    XP_006716427.1
    XP_011542880.1
    XP_011542885.1
    XP_011542887.1
    XP_016869114.1
    XP_024302958.1
    XP_024302959.1
    XP_024302960.1
    XP_024302961.1
    XP_047277916.1
    XP_047277917.1
    XP_047277918.1
    XP_047277919.1
    XP_047277920.1
    XP_047277921.1
    XP_047277922.1
    XP_047277923.1
    XP_047277924.1
    XP_047277925.1
    XP_047277926.1
    XP_047277927.1
    XP_047277928.1
    XP_047277929.1
    XP_047277930.1
    XP_047277931.1
    XP_047277932.1
    XP_047277933.1
    XP_047277934.1
    XP_047277935.1
    XP_054216777.1
    XP_054216778.1
    XP_054216779.1
    XP_054216780.1
    XP_054216781.1
    XP_054216782.1
    XP_054216783.1
    XP_054216784.1
    XP_054216785.1
    XP_054216786.1
    XP_054216787.1
    XP_054216788.1
    XP_054216789.1
    XP_054216790.1
    XP_054216791.1
    XP_054216792.1
    XP_054216793.1
    XP_054216794.1
    XP_054216795.1
    XP_054216796.1
    XP_054216797.1
    XP_054216798.1
    XP_054216799.1
    XP_054216800.1
    XP_054216801.1
    XP_054216802.1
    XP_054216803.1
    XP_054216804.1
    XP_054216805.1
    XP_054216806.1
    XP_054216807.1
    XP_054216808.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001130518.2 → NP_001123990.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      See identical proteins and their annotated locations for NP_001123990.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) encodes the supported protein. Variants 1, 2 and 4 through 23 all encode the same protein.
      Source sequence(s)
      AK314625, BQ016671, BX104931, BX649103, CR998055, DA244956, DA404904
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Related
      ENSP00000411816.2, ENST00000454498.6
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    2. NM_001354475.2 → NP_001341404.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090541, AC090786, AC116376, BQ016671
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Related
      ENSP00000512246.1, ENST00000695896.1
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    3. NM_001354476.2 → NP_001341405.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (5) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090541, AC090786, AC116376, BQ016671
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Related
      ENSP00000512247.1, ENST00000695897.1
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    4. NM_001354477.2 → NP_001341406.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (6) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090541, AC090786, AC116376, BQ016671
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    5. NM_001354480.2 → NP_001341409.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (7) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090541, AC090786, AC116376, BQ016671
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    6. NM_001354481.2 → NP_001341410.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (8) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090541, AC090786, AC116376, BQ016671
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Related
      ENSP00000512243.1, ENST00000695893.1
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    7. NM_001354483.2 → NP_001341412.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (9) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090786, AC116376, BQ016671, HY140335
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Related
      ENSP00000509853.1, ENST00000692225.2
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    8. NM_001354484.2 → NP_001341413.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (10) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090541, AC090786, AC116376, BQ016671, HY140335
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Related
      ENSP00000512245.1, ENST00000695895.1
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    9. NM_001354485.2 → NP_001341414.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (11) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090786, AC116376, BQ016671, HY140335
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    10. NM_001354487.2 → NP_001341416.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (12) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090786, AC116376, BQ016671, HY140335
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    11. NM_001354488.2 → NP_001341417.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (13) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090541, AC090786, AC116376, BQ016671, HY140335
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    12. NM_001354489.2 → NP_001341418.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (14) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090786, AC116376, BQ016671, HY140335
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    13. NM_001354490.2 → NP_001341419.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (15) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090541, AC090786, AC116376, BQ016671
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    14. NM_001354491.2 → NP_001341420.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (16) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090786, AC116376, BQ016671, DA244956
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    15. NM_001354492.2 → NP_001341421.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (17) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090786, AC116376, BQ016671, DA244956
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    16. NM_001354494.2 → NP_001341423.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (18) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090786, AC116376, BQ016671, DA244956
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    17. NM_001354495.2 → NP_001341424.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (19) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090786, AC116376, BQ016671, DA244956
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    18. NM_001354496.2 → NP_001341425.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (20) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090786, AC116376, BQ016671, DA244956
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    19. NM_001354497.2 → NP_001341426.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (21) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090786, BQ016671, DA244956
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    20. NM_001354498.2 → NP_001341427.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (22) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090786, AC116376, BQ016671, DA244956
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    21. NM_001354499.2 → NP_001341428.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (23) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein,
      Source sequence(s)
      AC090786, AC116376, BQ016671, DA244956
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    22. NM_018371.5 → NP_060841.5  chondroitin sulfate N-acetylgalactosaminyltransferase 1

      See identical proteins and their annotated locations for NP_060841.5

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 4 through 23 all encode the same protein.
      Source sequence(s)
      AC090541, AK314625, AY358441, BQ016671, BX104931, CR998055
      Consensus CDS
      CCDS6010.1
      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Related
      ENSP00000330805.6, ENST00000332246.10
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    RNA

    1. NR_024040.3 RNA Sequence

      Status: REVIEWED

      Description
      Transcript Variant: This variant (3) contains alternate 5' exon structure and includes an additional internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
      Source sequence(s)
      AC090541, AC090786, BC060772, BQ016671
      Related
      ENST00000397998.7

    2. NR_148897.2 RNA Sequence

      Status: REVIEWED

      Description
      Transcript Variant: This variant (24) contains alternate 5' exon structure and includes an additional internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
      Source sequence(s)
      AC090541, AC090786, AC116376, BQ016671

    3. NR_148898.2 RNA Sequence

      Status: REVIEWED

      Description
      Transcript Variant: This variant (25) contains alternate 5' exon structure and includes an additional internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
      Source sequence(s)
      AC090541, AC090786, AC116376, BQ016671

    4. NR_148899.2 RNA Sequence

      Status: REVIEWED

      Description
      Transcript Variant: This variant (26) contains alternate 5' exon structure and includes an additional internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
      Source sequence(s)
      AC090786, AC116376, BQ016671, HY140335

    5. NR_148900.2 RNA Sequence

      Status: REVIEWED

      Description
      Transcript Variant: This variant (27) contains alternate 5' exon structure and includes an additional internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
      Source sequence(s)
      AC090786, AC116376, BQ016671, HY140335

    6. NR_148901.2 RNA Sequence

      Status: REVIEWED

      Description
      Transcript Variant: This variant (28) contains alternate 5' exon structure and includes an additional internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
      Source sequence(s)
      AC090786, AC116376, BQ016671, DA244956

    7. NR_148902.2 RNA Sequence

      Status: REVIEWED

      Description
      Transcript Variant: This variant (29) contains alternate 5' exon structure and includes an additional internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
      Source sequence(s)
      AC090786, AC116376, BQ016671, DA244956
      Related
      ENST00000695899.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      19404161..19757908 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047421960.1 → XP_047277916.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    2. XM_047421971.1 → XP_047277927.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    3. XM_047421964.1 → XP_047277920.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Related
      ENSP00000512248.1, ENST00000695898.1

    4. XM_047421977.1 → XP_047277933.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    5. XM_047421961.1 → XP_047277917.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Related
      ENSP00000512244.1, ENST00000695894.1

    6. XM_047421969.1 → XP_047277925.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    7. XM_047421976.1 → XP_047277932.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    8. XM_047421965.1 → XP_047277921.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    9. XM_024447193.2 → XP_024302961.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    10. XM_047421972.1 → XP_047277928.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    11. XM_047421973.1 → XP_047277929.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    12. XM_047421975.1 → XP_047277931.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    13. XM_047421963.1 → XP_047277919.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    14. XM_047421962.1 → XP_047277918.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    15. XM_047421968.1 → XP_047277924.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    16. XM_047421979.1 → XP_047277935.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    17. XM_047421970.1 → XP_047277926.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    18. XM_047421974.1 → XP_047277930.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    19. XM_006716363.1 → XP_006716426.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      See identical proteins and their annotated locations for XP_006716426.1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    20. XM_024447192.2 → XP_024302960.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    21. XM_024447191.2 → XP_024302959.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    22. XM_047421978.1 → XP_047277934.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    23. XM_047421967.1 → XP_047277923.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    24. XM_047421966.1 → XP_047277922.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Related
      ENSP00000512242.1, ENST00000695892.1

    25. XM_024447190.1 → XP_024302958.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    26. XM_006716360.4 → XP_006716423.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      See identical proteins and their annotated locations for XP_006716423.1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    27. XM_011544578.3 → XP_011542880.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      See identical proteins and their annotated locations for XP_011542880.1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    28. XM_011544583.2 → XP_011542885.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      See identical proteins and their annotated locations for XP_011542885.1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    29. XM_017013625.2 → XP_016869114.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    30. XM_006716364.4 → XP_006716427.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      See identical proteins and their annotated locations for XP_006716427.1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9
      Conserved Domains (1) summary
      cl11394
      Location:70 → 507
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    31. XM_011544585.4 → XP_011542887.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X2

      Conserved Domains (1) summary
      cl11394
      Location:12 → 259
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    RNA

    1. XR_007060745.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      19669045..20022919 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054360832.1 → XP_054216807.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    2. XM_054360803.1 → XP_054216778.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    3. XM_054360820.1 → XP_054216795.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    4. XM_054360811.1 → XP_054216786.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    5. XM_054360828.1 → XP_054216803.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    6. XM_054360804.1 → XP_054216779.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    7. XM_054360821.1 → XP_054216796.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    8. XM_054360817.1 → XP_054216792.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    9. XM_054360827.1 → XP_054216802.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    10. XM_054360813.1 → XP_054216788.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    11. XM_054360822.1 → XP_054216797.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    12. XM_054360823.1 → XP_054216798.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    13. XM_054360826.1 → XP_054216801.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    14. XM_054360810.1 → XP_054216785.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    15. XM_054360818.1 → XP_054216793.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    16. XM_054360830.1 → XP_054216805.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    17. XM_054360819.1 → XP_054216794.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    18. XM_054360824.1 → XP_054216799.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    19. XM_054360831.1 → XP_054216806.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    20. XM_054360805.1 → XP_054216780.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    21. XM_054360808.1 → XP_054216783.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    22. XM_054360802.1 → XP_054216777.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    23. XM_054360829.1 → XP_054216804.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    24. XM_054360815.1 → XP_054216790.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    25. XM_054360814.1 → XP_054216789.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    26. XM_054360809.1 → XP_054216784.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    27. XM_054360807.1 → XP_054216782.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    28. XM_054360806.1 → XP_054216781.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    29. XM_054360825.1 → XP_054216800.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    30. XM_054360812.1 → XP_054216787.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    31. XM_054360816.1 → XP_054216791.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1

      UniProtKB/Swiss-Prot
      B2RBE4, Q6P9G6, Q8IUF9, Q8TDX6, Q9NSQ7, Q9NUM9

    32. XM_054360833.1 → XP_054216808.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X2

    RNA

    1. XR_008487863.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8TDX6.2 GenPept UniProtKB/Swiss-Prot:Q8TDX6

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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