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    SRSF11 serine and arginine rich splicing factor 11 [ Bos taurus (domestic cattle) ]

    Gene ID: 513451, updated on 10-Oct-2024

    Summary

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    Official Symbol
    SRSF11provided by VGNC
    Official Full Name
    serine and arginine rich splicing factor 11provided by VGNC
    Primary source
    VGNC:VGNC:35299
    See related
    Ensembl:ENSBTAG00000015474
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    SFRS11
    Orthologs
    human mouse all
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    Genomic context

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    See SRSF11 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (74927065..74977459, complement)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene cystathionine gamma-lyase Neighboring gene ankyrin repeat domain 13C Neighboring gene leucine rich repeat containing 40 Neighboring gene leucine rich repeat containing 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC139252

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/arginine-rich splicing factor 11
    Names
    splicing factor, arginine/serine-rich 11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075621.1 → NP_001069089.1  serine/arginine-rich splicing factor 11

      See identical proteins and their annotated locations for NP_001069089.1

      Status: PROVISIONAL

      Source sequence(s)
      BC118154
      UniProtKB/TrEMBL
      F6RDU5, Q148M1
      Related
      ENSBTAP00000020564.6, ENSBTAT00000020564.7
      Conserved Domains (1) summary
      cd12518
      Location:33 → 112
      RRM_SRSF11; RNA recognition motif in serine/arginine-rich splicing factor 11 (SRSF11) and similar proteins

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      74927065..74977459 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010803438.4 → XP_010801740.1  serine/arginine-rich splicing factor 11 isoform X1

      See identical proteins and their annotated locations for XP_010801740.1

      UniProtKB/TrEMBL
      F6RDU5
      Conserved Domains (1) summary
      cd12518
      Location:33 → 112
      RRM_SRSF11; RNA recognition motif in serine/arginine-rich splicing factor 11 (SRSF11) and similar proteins

    2. XM_059883803.1 → XP_059739786.1  serine/arginine-rich splicing factor 11 isoform X4

    3. XM_059883801.1 → XP_059739784.1  serine/arginine-rich splicing factor 11 isoform X3

      UniProtKB/TrEMBL
      Q148M1

    4. XM_059883796.1 → XP_059739779.1  serine/arginine-rich splicing factor 11 isoform X2

    5. XM_059883792.1 → XP_059739775.1  serine/arginine-rich splicing factor 11 isoform X1

    6. XM_059883808.1 → XP_059739791.1  serine/arginine-rich splicing factor 11 isoform X1

    7. XM_059883809.1 → XP_059739792.1  serine/arginine-rich splicing factor 11 isoform X5

    Nucleotide Protein Strain
    Heading Accession and Version

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