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    MARCHF7 membrane associated ring-CH-type finger 7 [ Bos taurus (domestic cattle) ]

    Gene ID: 507865, updated on 10-Oct-2024

    Summary

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    Official Symbol
    MARCHF7provided by VGNC
    Official Full Name
    membrane associated ring-CH-type finger 7provided by VGNC
    Primary source
    VGNC:VGNC:31242
    See related
    BGD:BT26541; Ensembl:ENSBTAG00000008755
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    MARCH7
    Orthologs
    human mouse all
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    Genomic context

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    See MARCHF7 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (36579471..36627192, complement)

    Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene lymphocyte antigen 75 Neighboring gene CD302 molecule Neighboring gene large ribosomal subunit protein uL30-like Neighboring gene bromodomain adjacent to zinc finger domain 2B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin conjugating enzyme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein autoubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase MARCHF7
    Names
    membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
    NP_001093787.1
    XP_005202482.1
    XP_015330707.1
    XP_015330713.1
    XP_024855805.1
    XP_024855806.1
    XP_024855811.1
    XP_024855817.1
    XP_059748452.1
    XP_059748457.1
    XP_059748459.1
    XP_059748462.1
    XP_059748466.1
    XP_059748469.1
    XP_059748471.1
    XP_059748478.1
    XP_059748482.1
    XP_059748488.1
    XP_059748492.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001100317.1 → NP_001093787.1  E3 ubiquitin-protein ligase MARCHF7

      See identical proteins and their annotated locations for NP_001093787.1

      Status: PROVISIONAL

      Source sequence(s)
      BC150112
      UniProtKB/TrEMBL
      A0A3Q1LN86, A6QR47
      Related
      ENSBTAP00000011533.5, ENSBTAT00000011533.6
      Conserved Domains (1) summary
      cl17238
      Location:549 → 607
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      36579471..36627192 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025000049.2 → XP_024855817.1  E3 ubiquitin-protein ligase MARCHF7 isoform X11

      UniProtKB/TrEMBL
      A0A3Q1LN86, A0A3Q1MJP8
      Conserved Domains (1) summary
      cl17238
      Location:549 → 607
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    2. XM_025000038.2 → XP_024855806.1  E3 ubiquitin-protein ligase MARCHF7 isoform X8

      UniProtKB/TrEMBL
      A0A3Q1LN86, A6QR47
      Related
      ENSBTAP00000084487.1, ENSBTAT00000115867.1
      Conserved Domains (1) summary
      cl17238
      Location:549 → 607
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    3. XM_059892474.1 → XP_059748457.1  E3 ubiquitin-protein ligase MARCHF7 isoform X1

    4. XM_005202425.5 → XP_005202482.1  E3 ubiquitin-protein ligase MARCHF7 isoform X11

      UniProtKB/TrEMBL
      A0A3Q1LN86, A0A3Q1MJP8
      Related
      ENSBTAP00000071597.1, ENSBTAT00000073734.2
      Conserved Domains (1) summary
      cl17238
      Location:549 → 607
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    5. XM_025000043.2 → XP_024855811.1  E3 ubiquitin-protein ligase MARCHF7 isoform X9

      UniProtKB/TrEMBL
      A0A3Q1LN86, A0A3Q1M189
      Related
      ENSBTAP00000063741.2, ENSBTAT00000069844.2
      Conserved Domains (1) summary
      cl17238
      Location:549 → 607
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    6. XM_025000037.2 → XP_024855805.1  E3 ubiquitin-protein ligase MARCHF7 isoform X7

      UniProtKB/TrEMBL
      A0A3Q1LN86
      Conserved Domains (1) summary
      cl17238
      Location:549 → 607
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    7. XM_059892479.1 → XP_059748462.1  E3 ubiquitin-protein ligase MARCHF7 isoform X2

      UniProtKB/TrEMBL
      A0AAA9RTQ8
      Related
      ENSBTAP00000076425.1, ENSBTAT00000098199.1

    8. XM_059892483.1 → XP_059748466.1  E3 ubiquitin-protein ligase MARCHF7 isoform X3

    9. XM_059892469.1 → XP_059748452.1  E3 ubiquitin-protein ligase MARCHF7 isoform X1

    10. XM_059892476.1 → XP_059748459.1  E3 ubiquitin-protein ligase MARCHF7 isoform X1

    11. XM_059892505.1 → XP_059748488.1  E3 ubiquitin-protein ligase MARCHF7 isoform X12

    12. XM_059892509.1 → XP_059748492.1  E3 ubiquitin-protein ligase MARCHF7 isoform X13

    13. XM_059892499.1 → XP_059748482.1  E3 ubiquitin-protein ligase MARCHF7 isoform X10

    14. XM_059892495.1 → XP_059748478.1  E3 ubiquitin-protein ligase MARCHF7 isoform X10

    15. XM_059892488.1 → XP_059748471.1  E3 ubiquitin-protein ligase MARCHF7 isoform X5

    16. XM_059892486.1 → XP_059748469.1  E3 ubiquitin-protein ligase MARCHF7 isoform X5

    17. XM_015475221.3 → XP_015330707.1  E3 ubiquitin-protein ligase MARCHF7 isoform X4

      UniProtKB/TrEMBL
      A0A3Q1LN86
      Conserved Domains (1) summary
      smart00744
      Location:549 → 605
      RINGv; The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins

    18. XM_015475227.3 → XP_015330713.1  E3 ubiquitin-protein ligase MARCHF7 isoform X6

      UniProtKB/TrEMBL
      A0A3Q1LN86
      Related
      ENSBTAP00000058248.2, ENSBTAT00000067270.2
      Conserved Domains (1) summary
      smart00744
      Location:549 → 605
      RINGv; The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins

    RNA

    1. XR_009496778.1 RNA Sequence

    2. XR_233546.5 RNA Sequence

    3. XR_001502098.3 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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