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    FGF13 fibroblast growth factor 13 [ Canis lupus familiaris (dog) ]

    Gene ID: 492174, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FGF13provided by VGNC
    Official Full Name
    fibroblast growth factor 13provided by VGNC
    Primary source
    VGNC:VGNC:40842
    See related
    Ensembl:ENSCAFG00845029595
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See FGF13 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) X NC_051843.1 (110643849..111167345, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) X NC_006621.4 (94485065..95008516, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) X NC_049260.1 (109612364..110135626, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) X NC_049299.1 (107778374..108301828, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) X NC_049780.1 (109963120..110485873, complement)

    Chromosome X - NC_051843.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111094900 Neighboring gene putative MAGE domain-containing protein MAGEA13P Neighboring gene H2A.Q variant histone 1 Neighboring gene microRNA mir-504 Neighboring gene broad substrate specificity ATP-binding cassette transporter ABCG2-like Neighboring gene 60S ribosomal protein L17-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fibroblast growth factor receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables growth factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in animal organ morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fibroblast growth factor receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    fibroblast growth factor 13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051843.1 Reference ROS_Cfam_1.0

      Range
      110643849..111167345 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038450989.1 → XP_038306917.1  fibroblast growth factor 13 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NGF6, A0A8C0S5S3, A0A8I3Q444
      Conserved Domains (1) summary
      smart00442
      Location:77 → 207
      FGF; Acidic and basic fibroblast growth factor family

    2. XM_038450987.1 → XP_038306915.1  fibroblast growth factor 13 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NGF6, A0A8C0S5S3, A0A8I3Q444
      Conserved Domains (1) summary
      smart00442
      Location:77 → 207
      FGF; Acidic and basic fibroblast growth factor family

    3. XM_038450991.1 → XP_038306919.1  fibroblast growth factor 13 isoform X3

      UniProtKB/TrEMBL
      A0A8C0S5F3, A0A8I3SCD7
      Related
      ENSCAFP00845041171.1, ENSCAFT00845052474.1
      Conserved Domains (1) summary
      smart00442
      Location:21 → 151
      FGF; Acidic and basic fibroblast growth factor family

    4. XM_038450988.1 → XP_038306916.1  fibroblast growth factor 13 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NGF6, A0A8C0S5S3, A0A8I3Q444
      Related
      ENSCAFP00845041152.1, ENSCAFT00845052452.1
      Conserved Domains (1) summary
      smart00442
      Location:77 → 207
      FGF; Acidic and basic fibroblast growth factor family

    5. XM_038450993.1 → XP_038306921.1  fibroblast growth factor 13 isoform X4

      UniProtKB/TrEMBL
      A0A8C0NAP4, A0A8I3Q704
      Related
      ENSCAFP00845041192.1, ENSCAFT00845052502.1
      Conserved Domains (1) summary
      smart00442
      Location:14 → 144
      FGF; Acidic and basic fibroblast growth factor family

    6. XM_038450990.1 → XP_038306918.1  fibroblast growth factor 13 isoform X2

      UniProtKB/TrEMBL
      A0A8C0LJB3, A0A8C0S5R7, A0A8I3Q229
      Related
      ENSCAFP00845041210.1, ENSCAFT00845052520.1
      Conserved Domains (1) summary
      smart00442
      Location:67 → 197
      FGF; Acidic and basic fibroblast growth factor family

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049299.1 Alternate UMICH_Zoey_3.1

      Range
      107778374..108301828 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038524462.1 → XP_038380390.1  fibroblast growth factor 13 isoform X1

      Conserved Domains (1) summary
      smart00442
      Location:77 → 207
      FGF; Acidic and basic fibroblast growth factor family

    2. XM_038524460.1 → XP_038380388.1  fibroblast growth factor 13 isoform X1

      Conserved Domains (1) summary
      smart00442
      Location:77 → 207
      FGF; Acidic and basic fibroblast growth factor family

    3. XM_038524465.1 → XP_038380393.1  fibroblast growth factor 13 isoform X3

      Conserved Domains (1) summary
      smart00442
      Location:21 → 151
      FGF; Acidic and basic fibroblast growth factor family

    4. XM_038524461.1 → XP_038380389.1  fibroblast growth factor 13 isoform X1

      Conserved Domains (1) summary
      smart00442
      Location:77 → 207
      FGF; Acidic and basic fibroblast growth factor family

    5. XM_038524466.1 → XP_038380394.1  fibroblast growth factor 13 isoform X4

      Conserved Domains (1) summary
      smart00442
      Location:14 → 144
      FGF; Acidic and basic fibroblast growth factor family

    6. XM_038524464.1 → XP_038380392.1  fibroblast growth factor 13 isoform X2

      Conserved Domains (1) summary
      smart00442
      Location:67 → 197
      FGF; Acidic and basic fibroblast growth factor family

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049780.1 Alternate UNSW_CanFamBas_1.0

      Range
      109963120..110485873 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038652955.1 → XP_038508883.1  fibroblast growth factor 13 isoform X1

      Conserved Domains (1) summary
      smart00442
      Location:77 → 207
      FGF; Acidic and basic fibroblast growth factor family

    2. XM_038652953.1 → XP_038508881.1  fibroblast growth factor 13 isoform X1

      Conserved Domains (1) summary
      smart00442
      Location:77 → 207
      FGF; Acidic and basic fibroblast growth factor family

    3. XM_038652957.1 → XP_038508885.1  fibroblast growth factor 13 isoform X3

      Conserved Domains (1) summary
      smart00442
      Location:21 → 151
      FGF; Acidic and basic fibroblast growth factor family

    4. XM_038652954.1 → XP_038508882.1  fibroblast growth factor 13 isoform X1

      Conserved Domains (1) summary
      smart00442
      Location:77 → 207
      FGF; Acidic and basic fibroblast growth factor family

    5. XM_038652958.1 → XP_038508886.1  fibroblast growth factor 13 isoform X4

      Conserved Domains (1) summary
      smart00442
      Location:14 → 144
      FGF; Acidic and basic fibroblast growth factor family

    6. XM_038652956.1 → XP_038508884.1  fibroblast growth factor 13 isoform X2

      Conserved Domains (1) summary
      smart00442
      Location:67 → 197
      FGF; Acidic and basic fibroblast growth factor family

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049260.1 Alternate UU_Cfam_GSD_1.0

      Range
      109612364..110135626 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038588435.1 → XP_038444363.1  fibroblast growth factor 13 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NGF6, A0A8C0S5S3, A0A8I3Q444
      Conserved Domains (1) summary
      smart00442
      Location:77 → 207
      FGF; Acidic and basic fibroblast growth factor family

    2. XM_038588433.1 → XP_038444361.1  fibroblast growth factor 13 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NGF6, A0A8C0S5S3, A0A8I3Q444
      Conserved Domains (1) summary
      smart00442
      Location:77 → 207
      FGF; Acidic and basic fibroblast growth factor family

    3. XM_038588437.1 → XP_038444365.1  fibroblast growth factor 13 isoform X3

      UniProtKB/TrEMBL
      A0A8C0S5F3, A0A8I3SCD7
      Conserved Domains (1) summary
      smart00442
      Location:21 → 151
      FGF; Acidic and basic fibroblast growth factor family

    4. XM_038588434.1 → XP_038444362.1  fibroblast growth factor 13 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NGF6, A0A8C0S5S3, A0A8I3Q444
      Conserved Domains (1) summary
      smart00442
      Location:77 → 207
      FGF; Acidic and basic fibroblast growth factor family

    5. XM_038588438.1 → XP_038444366.1  fibroblast growth factor 13 isoform X4

      UniProtKB/TrEMBL
      A0A8C0NAP4, A0A8I3Q704
      Conserved Domains (1) summary
      smart00442
      Location:14 → 144
      FGF; Acidic and basic fibroblast growth factor family

    6. XM_038588436.1 → XP_038444364.1  fibroblast growth factor 13 isoform X2

      UniProtKB/TrEMBL
      A0A8C0LJB3, A0A8C0S5R7, A0A8I3Q229
      Conserved Domains (1) summary
      smart00442
      Location:67 → 197
      FGF; Acidic and basic fibroblast growth factor family

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      94485065..95008516 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038464863.1 → XP_038320791.1  fibroblast growth factor 13 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NGF6, A0A8C0S5S3, A0A8I3Q444
      Conserved Domains (1) summary
      smart00442
      Location:77 → 207
      FGF; Acidic and basic fibroblast growth factor family

    2. XM_022415872.2 → XP_022271580.1  fibroblast growth factor 13 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NGF6, A0A8C0S5S3, A0A8I3Q444
      Conserved Domains (1) summary
      smart00442
      Location:77 → 207
      FGF; Acidic and basic fibroblast growth factor family

    3. XM_022415873.2 → XP_022271581.1  fibroblast growth factor 13 isoform X3

      UniProtKB/TrEMBL
      A0A8C0S5F3, A0A8I3SCD7
      Conserved Domains (1) summary
      smart00442
      Location:21 → 151
      FGF; Acidic and basic fibroblast growth factor family

    4. XM_005641878.4 → XP_005641935.1  fibroblast growth factor 13 isoform X1

      See identical proteins and their annotated locations for XP_005641935.1

      UniProtKB/TrEMBL
      A0A8C0NGF6, A0A8C0S5S3, A0A8I3Q444
      Conserved Domains (1) summary
      smart00442
      Location:77 → 207
      FGF; Acidic and basic fibroblast growth factor family

    5. XM_022415874.2 → XP_022271582.1  fibroblast growth factor 13 isoform X4

      UniProtKB/TrEMBL
      A0A8C0NAP4, A0A8I3Q704
      Conserved Domains (1) summary
      smart00442
      Location:14 → 144
      FGF; Acidic and basic fibroblast growth factor family

    6. XM_549294.7 → XP_549294.3  fibroblast growth factor 13 isoform X2

      UniProtKB/TrEMBL
      A0A8C0LJB3, A0A8C0S5R7, A0A8I3Q229
      Conserved Domains (1) summary
      smart00442
      Location:67 → 197
      FGF; Acidic and basic fibroblast growth factor family
    Nucleotide Protein
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