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    KCNK13 potassium two pore domain channel subfamily K member 13 [ Canis lupus familiaris (dog) ]

    Gene ID: 490829, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KCNK13provided by VGNC
    Official Full Name
    potassium two pore domain channel subfamily K member 13provided by VGNC
    Primary source
    VGNC:VGNC:53499
    See related
    Ensembl:ENSCAFG00845012977
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See KCNK13 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (61399216..61495259)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (60706583..60802697)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (61457778..61553937)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (61080667..61176758)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (61129204..61225384)

    Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene tyrosyl-DNA phosphodiesterase 1 Neighboring gene small nucleolar RNA U13 Neighboring gene calcyclin-binding protein-like Neighboring gene proteasome 26S subunit, ATPase 1 Neighboring gene NRDE-2, necessary for RNA interference, domain containing Neighboring gene uncharacterized LOC119872918

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables potassium ion leak channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in stabilization of membrane potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    potassium channel subfamily K member 13
    Names
    potassium channel, subfamily K, member 13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051812.1 Reference ROS_Cfam_1.0

      Range
      61399216..61495259
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038674450.1 → XP_038530378.1  potassium channel subfamily K member 13

      UniProtKB/TrEMBL
      A0A8C0KR22, A0A8C0LZZ3, A0A8C0RWN1, A0A8I3NNF9
      Related
      ENSCAFP00845018091.1, ENSCAFT00845023076.1
      Conserved Domains (1) summary
      pfam07885
      Location:96 → 152
      Ion_trans_2; Ion channel

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049268.1 Alternate UMICH_Zoey_3.1

      Range
      61080667..61176758
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038484050.1 → XP_038339978.1  potassium channel subfamily K member 13

      Conserved Domains (1) summary
      pfam07885
      Location:96 → 152
      Ion_trans_2; Ion channel

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

      Range
      61129204..61225384
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038609640.1 → XP_038465568.1  potassium channel subfamily K member 13

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

      Range
      61457778..61553937
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038545545.1 → XP_038401473.1  potassium channel subfamily K member 13

      UniProtKB/TrEMBL
      A0A8C0KR22, A0A8C0LZZ3, A0A8C0RWN1, A0A8I3NNF9
      Conserved Domains (1) summary
      pfam07885
      Location:96 → 152
      Ion_trans_2; Ion channel

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      60706583..60802697
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038593800.1 → XP_038449728.1  potassium channel subfamily K member 13

      UniProtKB/TrEMBL
      A0A8C0LZZ3, A0A8P0SUB0
      Conserved Domains (1) summary
      pfam07885
      Location:96 → 152
      Ion_trans_2; Ion channel
    Nucleotide Protein
    Heading Accession and Version

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