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    STX6 syntaxin 6 [ Canis lupus familiaris (dog) ]

    Gene ID: 490303, updated on 17-Aug-2024

    Summary

    Official Symbol
    STX6provided by VGNC
    Official Full Name
    syntaxin 6provided by VGNC
    Primary source
    VGNC:VGNC:55762
    See related
    Ensembl:ENSCAFG00845002602
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    NEW
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    Genomic context

    See STX6 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 7 NC_051811.1 (14179873..14232084, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 7 NC_006589.4 (14030381..14083562, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 7 NC_049228.1 (14320679..14373902, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 7 NC_049267.1 (14089893..14143515, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 7 NC_049748.1 (14196719..14249919, complement)

    Chromosome 7 - NC_051811.1Genomic Context describing neighboring genes Neighboring gene KIAA1614 Neighboring gene uncharacterized LOC119872506 Neighboring gene 40S ribosomal protein S15a-like Neighboring gene major histocompatibility complex, class I-related Neighboring gene immediate early response 5

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNAP receptor activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables SNARE binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in Golgi vesicle transport IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in vesicle docking IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in vesicle fusion IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in endomembrane system IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in synaptic vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051811.1 Reference ROS_Cfam_1.0

      Range
      14179873..14232084 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038671036.1XP_038526964.1  syntaxin-6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0PVR0, A0A8C0R196, A0A8I3MH17, A0A8I3RQU0, A0A8P0SHJ8
      Related
      ENSCAFP00845003674.1, ENSCAFT00845004599.1
      Conserved Domains (2) summary
      cd15851
      Location:166231
      SNARE_Syntaxin6; SNARE motif of syntaxin 6
      cd21447
      Location:5107
      SNARE_NTD_STX6; N-terminal domain of syntaxin-6
    2. XM_038671037.1XP_038526965.1  syntaxin-6 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KLE8
      Conserved Domains (2) summary
      cd15851
      Location:166231
      SNARE_Syntaxin6; SNARE motif of syntaxin 6
      cd21447
      Location:5107
      SNARE_NTD_STX6; N-terminal domain of syntaxin-6
    3. XM_038671035.1XP_038526963.1  syntaxin-6 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KLE8, A0A8C0Q7K6
      Conserved Domains (2) summary
      cd15851
      Location:166231
      SNARE_Syntaxin6; SNARE motif of syntaxin 6
      cd21447
      Location:5107
      SNARE_NTD_STX6; N-terminal domain of syntaxin-6

    RNA

    1. XR_005429682.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049267.1 Alternate UMICH_Zoey_3.1

      Range
      14089893..14143515 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038480854.1XP_038336782.1  syntaxin-6 isoform X2

      Conserved Domains (2) summary
      cd15851
      Location:166231
      SNARE_Syntaxin6; SNARE motif of syntaxin 6
      cd21447
      Location:5107
      SNARE_NTD_STX6; N-terminal domain of syntaxin-6
    2. XM_038480855.1XP_038336783.1  syntaxin-6 isoform X3

      Conserved Domains (2) summary
      cd15851
      Location:166231
      SNARE_Syntaxin6; SNARE motif of syntaxin 6
      cd21447
      Location:5107
      SNARE_NTD_STX6; N-terminal domain of syntaxin-6
    3. XM_038480853.1XP_038336781.1  syntaxin-6 isoform X1

      Conserved Domains (2) summary
      cd15851
      Location:166231
      SNARE_Syntaxin6; SNARE motif of syntaxin 6
      cd21447
      Location:5107
      SNARE_NTD_STX6; N-terminal domain of syntaxin-6

    RNA

    1. XR_005328125.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049748.1 Alternate UNSW_CanFamBas_1.0

      Range
      14196719..14249919 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038606357.1XP_038462285.1  syntaxin-6 isoform X2

      Conserved Domains (2) summary
      cd15851
      Location:166231
      SNARE_Syntaxin6; SNARE motif of syntaxin 6
      cd21447
      Location:5107
      SNARE_NTD_STX6; N-terminal domain of syntaxin-6
    2. XM_038606359.1XP_038462287.1  syntaxin-6 isoform X3

      Conserved Domains (2) summary
      cd15851
      Location:166231
      SNARE_Syntaxin6; SNARE motif of syntaxin 6
      cd21447
      Location:5107
      SNARE_NTD_STX6; N-terminal domain of syntaxin-6
    3. XM_038606356.1XP_038462284.1  syntaxin-6 isoform X1

      Conserved Domains (2) summary
      cd15851
      Location:166231
      SNARE_Syntaxin6; SNARE motif of syntaxin 6
      cd21447
      Location:5107
      SNARE_NTD_STX6; N-terminal domain of syntaxin-6

    RNA

    1. XR_005396489.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049228.1 Alternate UU_Cfam_GSD_1.0

      Range
      14320679..14373902 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038542197.1XP_038398125.1  syntaxin-6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0PVR0, A0A8C0R196, A0A8I3MH17, A0A8I3RQU0, A0A8P0SHJ8
      Conserved Domains (2) summary
      cd15851
      Location:166231
      SNARE_Syntaxin6; SNARE motif of syntaxin 6
      cd21447
      Location:5107
      SNARE_NTD_STX6; N-terminal domain of syntaxin-6
    2. XM_038542198.1XP_038398126.1  syntaxin-6 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KLE8
      Conserved Domains (2) summary
      cd15851
      Location:166231
      SNARE_Syntaxin6; SNARE motif of syntaxin 6
      cd21447
      Location:5107
      SNARE_NTD_STX6; N-terminal domain of syntaxin-6
    3. XM_038542196.1XP_038398124.1  syntaxin-6 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KLE8, A0A8C0Q7K6
      Conserved Domains (2) summary
      cd15851
      Location:166231
      SNARE_Syntaxin6; SNARE motif of syntaxin 6
      cd21447
      Location:5107
      SNARE_NTD_STX6; N-terminal domain of syntaxin-6

    RNA

    1. XR_005361976.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006589.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      14030381..14083562 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005622389.4XP_005622446.1  syntaxin-6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0PVR0, A0A8C0R196, A0A8I3MH17, A0A8I3RQU0, A0A8P0SHJ8
      Conserved Domains (2) summary
      cd15851
      Location:166231
      SNARE_Syntaxin6; SNARE motif of syntaxin 6
      cd21447
      Location:5107
      SNARE_NTD_STX6; N-terminal domain of syntaxin-6
    2. XM_022420927.2XP_022276635.1  syntaxin-6 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KLE8
      Conserved Domains (2) summary
      cd15851
      Location:166231
      SNARE_Syntaxin6; SNARE motif of syntaxin 6
      cd21447
      Location:5107
      SNARE_NTD_STX6; N-terminal domain of syntaxin-6
    3. XM_022420926.2XP_022276634.2  syntaxin-6 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KLE8, A0A8C0Q7K6
      Conserved Domains (2) summary
      cd15851
      Location:166231
      SNARE_Syntaxin6; SNARE motif of syntaxin 6
      cd21447
      Location:5107
      SNARE_NTD_STX6; N-terminal domain of syntaxin-6

    RNA

    1. XR_005373545.1 RNA Sequence