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    PCOLCE procollagen C-endopeptidase enhancer [ Canis lupus familiaris (dog) ]

    Gene ID: 489835, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PCOLCEprovided by VGNC
    Official Full Name
    procollagen C-endopeptidase enhancerprovided by VGNC
    Primary source
    VGNC:VGNC:44316
    See related
    Ensembl:ENSCAFG00845001417
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See PCOLCE in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (9019351..9025225, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (10789558..10795432, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (9031772..9037646, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (8871854..8877728, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (8849536..8854860, complement)

    Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene motile sperm domain containing 3 Neighboring gene uncharacterized LOC111096206 Neighboring gene uncharacterized LOC119872146 Neighboring gene F-box protein 24 Neighboring gene leucine rich repeats and calponin homology domain containing 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    procollagen C-endopeptidase enhancer 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051810.1 Reference ROS_Cfam_1.0

      Range
      9019351..9025225 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038668048.1 → XP_038523976.1  procollagen C-endopeptidase enhancer 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YXT5, A0A8I3MFU6
      Related
      ENSCAFP00845001924.1, ENSCAFT00845002423.1
      Conserved Domains (2) summary
      cd00041
      Location:37 → 147
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd03576
      Location:348 → 471
      NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...

    2. XM_038668049.1 → XP_038523977.1  procollagen C-endopeptidase enhancer 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0R0W3, A0A8C0SJ81, A0A8I3MHG0
      Related
      ENSCAFP00845001937.1, ENSCAFT00845002438.1
      Conserved Domains (2) summary
      cd00041
      Location:37 → 147
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd03576
      Location:323 → 446
      NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049266.1 Alternate UMICH_Zoey_3.1

      Range
      8871854..8877728 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038477997.1 → XP_038333925.1  procollagen C-endopeptidase enhancer 1 isoform X1

      Conserved Domains (2) summary
      cd00041
      Location:37 → 147
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd03576
      Location:348 → 471
      NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...

    2. XM_038477998.1 → XP_038333926.1  procollagen C-endopeptidase enhancer 1 isoform X2

      Conserved Domains (2) summary
      cd00041
      Location:37 → 147
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd03576
      Location:323 → 446
      NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

      Range
      8849536..8854860 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038603343.1 → XP_038459271.1  procollagen C-endopeptidase enhancer 1 isoform X2

      Conserved Domains (2) summary
      cd00041
      Location:37 → 147
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd03576
      Location:323 → 446
      NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

      Range
      9031772..9037646 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038539262.1 → XP_038395190.1  procollagen C-endopeptidase enhancer 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YXT5, A0A8I3MFU6
      Conserved Domains (2) summary
      cd00041
      Location:37 → 147
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd03576
      Location:348 → 471
      NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...

    2. XM_038539263.1 → XP_038395191.1  procollagen C-endopeptidase enhancer 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0R0W3, A0A8C0SJ81, A0A8I3MHG0
      Conserved Domains (2) summary
      cd00041
      Location:37 → 147
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd03576
      Location:323 → 446
      NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      10789558..10795432 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038538456.1 → XP_038394384.1  procollagen C-endopeptidase enhancer 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YXT5, A0A8I3MFU6
      Conserved Domains (2) summary
      cd00041
      Location:37 → 147
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd03576
      Location:348 → 471
      NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...

    2. XM_854308.5 → XP_859401.1  procollagen C-endopeptidase enhancer 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0R0W3, A0A8C0SJ81, A0A8I3MHG0
      Conserved Domains (2) summary
      cd00041
      Location:37 → 147
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd03576
      Location:323 → 446
      NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...
    Nucleotide Protein
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