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    SORD sorbitol dehydrogenase [ Canis lupus familiaris (dog) ]

    Gene ID: 487535, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SORDprovided by VGNC
    Official Full Name
    sorbitol dehydrogenaseprovided by VGNC
    Primary source
    VGNC:VGNC:46662
    See related
    Ensembl:ENSCAFG00845028851
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See SORD in Genome Data Viewer
    Location:
    chromosome: 30
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 30 NC_051834.1 (11603460..11637883)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 30 NC_006612.4 (11523461..11557483)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 30 NC_049251.1 (11751896..11786120)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 30 NC_049290.1 (11509757..11544158)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 30 NC_049771.1 (11632822..11666883)

    Chromosome 30 - NC_051834.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111093295 Neighboring gene tripartite motif containing 69 Neighboring gene telomere repeat binding bouquet formation protein 2 Neighboring gene uncharacterized LOC111093338 Neighboring gene signal peptidase complex catalytic subunit SEC11A-like Neighboring gene thioredoxin-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-iditol 2-dehydrogenase (NAD+) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sorbitol catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sorbitol dehydrogenase
    XP_038298125.1
    XP_038372591.1
    XP_038436223.1
    XP_038500506.1
    XP_544659.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051834.1 Reference ROS_Cfam_1.0

      Range
      11603460..11637883
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038442197.1 → XP_038298125.1  sorbitol dehydrogenase

      UniProtKB/TrEMBL
      A0A8C0L8S0, A0A8C0NKQ6, A0A8C0R5P9, A0A8I3QI05
      Related
      ENSCAFP00845040108.1, ENSCAFT00845051149.1
      Conserved Domains (1) summary
      cd05285
      Location:11 → 349
      sorbitol_DH; Sorbitol dehydrogenase

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049290.1 Alternate UMICH_Zoey_3.1

      Range
      11509757..11544158
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038516663.1 → XP_038372591.1  sorbitol dehydrogenase

      Conserved Domains (1) summary
      cd05285
      Location:11 → 349
      sorbitol_DH; Sorbitol dehydrogenase

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049771.1 Alternate UNSW_CanFamBas_1.0

      Range
      11632822..11666883
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038644578.1 → XP_038500506.1  sorbitol dehydrogenase

      Conserved Domains (1) summary
      cd05285
      Location:11 → 349
      sorbitol_DH; Sorbitol dehydrogenase

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049251.1 Alternate UU_Cfam_GSD_1.0

      Range
      11751896..11786120
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038580295.1 → XP_038436223.1  sorbitol dehydrogenase

      UniProtKB/TrEMBL
      A0A8C0L8S0, A0A8C0NKQ6, A0A8C0R5P9, A0A8I3QI05
      Conserved Domains (1) summary
      cd05285
      Location:11 → 349
      sorbitol_DH; Sorbitol dehydrogenase

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006612.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      11523461..11557483
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_544659.4 → XP_544659.2  sorbitol dehydrogenase

      UniProtKB/TrEMBL
      A0A8C0L8S0, A0A8C0NKQ6, A0A8C0R5P9, A0A8I3QI05
      Conserved Domains (1) summary
      cd05285
      Location:11 → 349
      sorbitol_DH; Sorbitol dehydrogenase
    Nucleotide Protein
    Heading Accession and Version

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