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    CSRNP2 cysteine and serine rich nuclear protein 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 486541, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CSRNP2provided by VGNC
    Official Full Name
    cysteine and serine rich nuclear protein 2provided by VGNC
    Primary source
    VGNC:VGNC:39674
    See related
    Ensembl:ENSCAFG00845015572
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See CSRNP2 in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (3792281..3806963)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (42496695..42511358, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (42893439..42907726, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (3764415..3773710)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (3746414..3761072)

    Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene POU class 6 homeobox 1 Neighboring gene uncharacterized LOC119866366 Neighboring gene transcription factor CP2 Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene uncharacterized LOC106557897 Neighboring gene LETM1 domain containing 1 Neighboring gene solute carrier family 11 member 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cysteine/serine-rich nuclear protein 2; LOW QUALITY PROTEIN: cysteine/serine-rich nuclear protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051831.1 Reference ROS_Cfam_1.0

      Range
      3792281..3806963
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038438160.1 → XP_038294088.1  cysteine/serine-rich nuclear protein 2

      UniProtKB/TrEMBL
      A0A8C0Z3C5, A0A8I3P1Y8
      Conserved Domains (1) summary
      pfam16019
      Location:62 → 279
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

    2. XM_038438158.1 → XP_038294086.1  cysteine/serine-rich nuclear protein 2

      UniProtKB/TrEMBL
      A0A8C0Z3C5, A0A8I3P1Y8
      Conserved Domains (1) summary
      pfam16019
      Location:62 → 279
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

    3. XM_038438159.1 → XP_038294087.1  cysteine/serine-rich nuclear protein 2

      UniProtKB/TrEMBL
      A0A8C0Z3C5, A0A8I3P1Y8
      Related
      ENSCAFP00845021860.1, ENSCAFT00845027776.1
      Conserved Domains (1) summary
      pfam16019
      Location:62 → 279
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049287.1 Alternate UMICH_Zoey_3.1

      Range
      3764415..3773710
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038512848.1 → XP_038368776.1  LOW QUALITY PROTEIN: cysteine/serine-rich nuclear protein 2

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

      Range
      3746414..3761072
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038640612.1 → XP_038496540.1  cysteine/serine-rich nuclear protein 2

    2. XM_038640610.1 → XP_038496538.1  cysteine/serine-rich nuclear protein 2

    3. XM_038640611.1 → XP_038496539.1  cysteine/serine-rich nuclear protein 2

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

      Range
      42893439..42907726 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038577678.1 → XP_038433606.1  cysteine/serine-rich nuclear protein 2

      UniProtKB/TrEMBL
      A0A8C0PPV3, A0A8C0Z3C5

    2. XM_038577677.1 → XP_038433605.1  cysteine/serine-rich nuclear protein 2

      UniProtKB/TrEMBL
      A0A8C0PPV3, A0A8C0Z3C5

    3. XM_038577679.1 → XP_038433607.1  cysteine/serine-rich nuclear protein 2

      UniProtKB/TrEMBL
      A0A8C0PPV3, A0A8C0Z3C5

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      42496695..42511358 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_845163.5 → XP_850256.2  cysteine/serine-rich nuclear protein 2

      UniProtKB/TrEMBL
      A0A8C0Z3C5, A0A8P0SD95
      Conserved Domains (1) summary
      pfam16019
      Location:62 → 279
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

    2. XM_005636818.4 → XP_005636875.2  cysteine/serine-rich nuclear protein 2

      UniProtKB/TrEMBL
      A0A8C0Z3C5, A0A8P0SD95
      Conserved Domains (1) summary
      pfam16019
      Location:62 → 279
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

    3. XM_038460118.1 → XP_038316046.1  cysteine/serine-rich nuclear protein 2

      UniProtKB/TrEMBL
      A0A8C0Z3C5, A0A8P0SD95
      Conserved Domains (1) summary
      pfam16019
      Location:62 → 279
      CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus
    Nucleotide Protein
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