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    PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 484963, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PIN1provided by VGNC
    Official Full Name
    peptidylprolyl cis/trans isomerase, NIMA-interacting 1provided by VGNC
    Primary source
    VGNC:VGNC:81920
    See related
    Ensembl:ENSCAFG00845022850
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See PIN1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (51678053..51689301, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (51020467..51031712, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (51551926..51563171, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (50885803..50897042, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (51310556..51321796, complement)

    Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene collagen type V alpha 3 chain Neighboring gene olfactomedin 2 Neighboring gene uncharacterized LOC119864750 Neighboring gene uncharacterized LOC102153974 Neighboring gene ubiquitin like 5 Neighboring gene F-box and leucine rich repeat protein 12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptidyl-prolyl cis-trans isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
    Names
    protein (peptidylprolyl cis/trans isomerase) NIMA-interacting 1
    XP_038284619.1
    XP_038360263.1
    XP_038423295.1
    XP_038487443.1
    XP_542080.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051824.1 Reference ROS_Cfam_1.0

      Range
      51678053..51689301 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038428691.1 → XP_038284619.1  peptidyl-prolyl cis-trans isomerase NIMA-interacting 1

      UniProtKB/TrEMBL
      A0A8C0R6L5, A0A8C0TJ18
      Related
      ENSCAFP00845031584.1, ENSCAFT00845040327.1
      Conserved Domains (2) summary
      pfam00397
      Location:7 → 37
      WW; WW domain
      cl29122
      Location:51 → 162
      Rotamase_2; PPIC-type PPIASE domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049280.1 Alternate UMICH_Zoey_3.1

      Range
      50885803..50897042 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038504335.1 → XP_038360263.1  peptidyl-prolyl cis-trans isomerase NIMA-interacting 1

      Conserved Domains (2) summary
      pfam00397
      Location:7 → 37
      WW; WW domain
      cl29122
      Location:51 → 162
      Rotamase_2; PPIC-type PPIASE domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

      Range
      51310556..51321796 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038631515.1 → XP_038487443.1  peptidyl-prolyl cis-trans isomerase NIMA-interacting 1

      Conserved Domains (2) summary
      pfam00397
      Location:7 → 37
      WW; WW domain
      cl29122
      Location:51 → 162
      Rotamase_2; PPIC-type PPIASE domain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

      Range
      51551926..51563171 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038567367.1 → XP_038423295.1  peptidyl-prolyl cis-trans isomerase NIMA-interacting 1

      UniProtKB/TrEMBL
      A0A8C0R6L5, A0A8C0TJ18
      Conserved Domains (2) summary
      pfam00397
      Location:7 → 37
      WW; WW domain
      cl29122
      Location:51 → 162
      Rotamase_2; PPIC-type PPIASE domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      51020467..51031712 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_542080.5 → XP_542080.1  peptidyl-prolyl cis-trans isomerase NIMA-interacting 1

      See identical proteins and their annotated locations for XP_542080.1

      UniProtKB/TrEMBL
      A0A8C0R6L5, A0A8C0TJ18
      Conserved Domains (2) summary
      pfam00397
      Location:7 → 37
      WW; WW domain
      cl29122
      Location:51 → 162
      Rotamase_2; PPIC-type PPIASE domain
    Nucleotide Protein
    Heading Accession and Version

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