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    SUMF1 sulfatase modifying factor 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 484681, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SUMF1provided by VGNC
    Official Full Name
    sulfatase modifying factor 1provided by VGNC
    Primary source
    VGNC:VGNC:46982
    See related
    Ensembl:ENSCAFG00845012121
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See SUMF1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (13137091..13228066)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (13066961..13163715)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (13169249..13260076)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (12841772..12932488)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (13182237..13272688)

    Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119864641 Neighboring gene inositol 1,4,5-trisphosphate receptor type 1 Neighboring gene uncharacterized LOC119864640 Neighboring gene histone deacetylase complex subunit SAP18-like Neighboring gene uncharacterized LOC102152638 Neighboring gene SET domain without mariner transposase fusion Neighboring gene CWC15 spliceosome-associated protein homolog (S. cerevisiae) pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sulfatase-modifying factor 1; formylglycine-generating enzyme

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051824.1 Reference ROS_Cfam_1.0

      Range
      13137091..13228066
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038427092.1 → XP_038283020.1  formylglycine-generating enzyme

      UniProtKB/TrEMBL
      A0A8C0KPK0, A0A8C0NBT1, A0A8C0QBH7, A0A8I3NK85, A0A8I3RZ82
      Related
      ENSCAFP00845016960.1, ENSCAFT00845021586.1
      Conserved Domains (1) summary
      pfam03781
      Location:91 → 367
      FGE-sulfatase; Sulfatase-modifying factor enzyme 1

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049280.1 Alternate UMICH_Zoey_3.1

      Range
      12841772..12932488
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038502864.1 → XP_038358792.1  formylglycine-generating enzyme

      Conserved Domains (1) summary
      pfam03781
      Location:91 → 367
      FGE-sulfatase; Sulfatase-modifying factor enzyme 1

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

      Range
      13182237..13272688
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038629924.1 → XP_038485852.1  formylglycine-generating enzyme

      Conserved Domains (1) summary
      pfam03781
      Location:91 → 367
      FGE-sulfatase; Sulfatase-modifying factor enzyme 1

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

      Range
      13169249..13260076
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038565800.1 → XP_038421728.1  formylglycine-generating enzyme

      UniProtKB/TrEMBL
      A0A8C0KPK0, A0A8C0NBT1, A0A8C0QBH7, A0A8I3NK85, A0A8I3RZ82
      Conserved Domains (1) summary
      pfam03781
      Location:91 → 367
      FGE-sulfatase; Sulfatase-modifying factor enzyme 1

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      13066961..13163715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_541796.6 → XP_541796.2  formylglycine-generating enzyme

      UniProtKB/TrEMBL
      A0A8C0KPK0, A0A8C0NBT1, A0A8C0QBH7, A0A8I3NK85, A0A8I3RZ82
      Conserved Domains (1) summary
      pfam03781
      Location:91 → 367
      FGE-sulfatase; Sulfatase-modifying factor enzyme 1
    Nucleotide Protein
    Heading Accession and Version

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