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    CADM4 cell adhesion molecule 4 [ Canis lupus familiaris (dog) ]

    Gene ID: 484465, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CADM4provided by VGNC
    Official Full Name
    cell adhesion molecule 4provided by VGNC
    Primary source
    VGNC:VGNC:53675
    See related
    Ensembl:ENSCAFG00845008687
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See CADM4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (112108192..112122853)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (110977797..110992457)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (112214399..112229059)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (111696331..111710988)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (111330179..111344834)

    Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene urokinase plasminogen activator surface receptor-like Neighboring gene plasminogen activator, urokinase receptor Neighboring gene uncharacterized LOC119866123 Neighboring gene zinc finger protein 428 Neighboring gene zinc finger protein 576 Neighboring gene immunity related GTPase Q

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables vascular endothelial growth factor receptor 2 binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of peptidyl-tyrosine phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of Rac protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of wound healing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell-cell contact zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cell adhesion molecule 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051805.1 Reference ROS_Cfam_1.0

      Range
      112108192..112122853
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038656780.1 → XP_038512708.1  cell adhesion molecule 4

      UniProtKB/TrEMBL
      A0A8C0LS52, A0A8C0LYS5, A0A8I3RW86
      Related
      ENSCAFP00845011863.1, ENSCAFT00845015278.1
      Conserved Domains (5) summary
      smart00294
      Location:344 → 362
      4.1m; putative band 4.1 homologues' binding motif
      pfam13927
      Location:224 → 295
      Ig_3; Immunoglobulin domain
      cd00096
      Location:30 → 36
      Ig; Ig strand A' [structural motif]
      cd05885
      Location:121 → 220
      IgI_2_Necl-4; Second immunoglobulin (Ig)-like domain of nectin-like molecule-4 (Necl-4); member of the I-set of Ig superfamily domains
      cl11960
      Location:29 → 120
      Ig; Immunoglobulin domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049261.1 Alternate UMICH_Zoey_3.1

      Range
      111696331..111710988
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038467963.1 → XP_038323891.1  cell adhesion molecule 4

      Conserved Domains (5) summary
      smart00294
      Location:344 → 362
      4.1m; putative band 4.1 homologues' binding motif
      pfam13927
      Location:224 → 295
      Ig_3; Immunoglobulin domain
      cd00096
      Location:30 → 36
      Ig; Ig strand A' [structural motif]
      cd05885
      Location:121 → 220
      IgI_2_Necl-4; Second immunoglobulin (Ig)-like domain of nectin-like molecule-4 (Necl-4); member of the I-set of Ig superfamily domains
      cl11960
      Location:29 → 120
      Ig; Immunoglobulin domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

      Range
      111330179..111344834
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038592972.1 → XP_038448900.1  cell adhesion molecule 4

      Conserved Domains (5) summary
      smart00294
      Location:344 → 362
      4.1m; putative band 4.1 homologues' binding motif
      pfam13927
      Location:224 → 295
      Ig_3; Immunoglobulin domain
      cd00096
      Location:30 → 36
      Ig; Ig strand A' [structural motif]
      cd05885
      Location:121 → 220
      IgI_2_Necl-4; Second immunoglobulin (Ig)-like domain of nectin-like molecule-4 (Necl-4); member of the I-set of Ig superfamily domains
      cl11960
      Location:29 → 120
      Ig; Immunoglobulin domain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

      Range
      112214399..112229059
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038528693.1 → XP_038384621.1  cell adhesion molecule 4

      UniProtKB/TrEMBL
      A0A8C0LS52, A0A8C0LYS5, A0A8I3RW86
      Conserved Domains (5) summary
      smart00294
      Location:344 → 362
      4.1m; putative band 4.1 homologues' binding motif
      pfam13927
      Location:224 → 295
      Ig_3; Immunoglobulin domain
      cd00096
      Location:30 → 36
      Ig; Ig strand A' [structural motif]
      cd05885
      Location:121 → 220
      IgI_2_Necl-4; Second immunoglobulin (Ig)-like domain of nectin-like molecule-4 (Necl-4); member of the I-set of Ig superfamily domains
      cl11960
      Location:29 → 120
      Ig; Immunoglobulin domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      110977797..110992457
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038435612.1 → XP_038291540.1  cell adhesion molecule 4

      UniProtKB/TrEMBL
      A0A8C0LS52, A0A8C0LYS5, A0A8I3RW86
      Conserved Domains (5) summary
      smart00294
      Location:344 → 362
      4.1m; putative band 4.1 homologues' binding motif
      pfam13927
      Location:224 → 295
      Ig_3; Immunoglobulin domain
      cd00096
      Location:30 → 36
      Ig; Ig strand A' [structural motif]
      cd05885
      Location:121 → 220
      IgI_2_Necl-4; Second immunoglobulin (Ig)-like domain of nectin-like molecule-4 (Necl-4); member of the I-set of Ig superfamily domains
      cl11960
      Location:29 → 120
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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