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    MTNR1A melatonin receptor 1A [ Canis lupus familiaris (dog) ]

    Gene ID: 482904, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MTNR1Aprovided by VGNC
    Official Full Name
    melatonin receptor 1Aprovided by VGNC
    Primary source
    VGNC:VGNC:110519
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See MTNR1A in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 16 NC_051820.1 (46475550..46506291)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 16 NC_006598.4 (44744863..44773476)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 16 NC_049237.1 (45187864..45219170)

    Chromosome 16 - NC_051820.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119869626 Neighboring gene FAT atypical cadherin 1 Neighboring gene uncharacterized LOC119869611 Neighboring gene uncharacterized LOC119874663 Neighboring gene uncharacterized LOC119869610 Neighboring gene kallikrein B1 Neighboring gene coagulation factor XI

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables melatonin receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    melatonin receptor type 1A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051820.1 Reference ROS_Cfam_1.0

      Range
      46475550..46506291
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038690395.1 → XP_038546323.1  melatonin receptor type 1A isoform X1

      Conserved Domains (1) summary
      cd15402
      Location:398 → 675
      7tmA_Mel1A; melatonin receptor subtype 1A, member of the class A family of seven-transmembrane G protein-coupled receptors

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049237.1 Alternate UU_Cfam_GSD_1.0

      Range
      45187864..45219170
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038559197.1 → XP_038415125.1  melatonin receptor type 1A isoform X1

      Conserved Domains (1) summary
      cd15402
      Location:398 → 675
      7tmA_Mel1A; melatonin receptor subtype 1A, member of the class A family of seven-transmembrane G protein-coupled receptors

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006598.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      44744863..44773476
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022404180.2 → XP_022259888.1  melatonin receptor type 1A isoform X2

      UniProtKB/TrEMBL
      A0A8C0QSS5, A0A8C0S3T9, A0A8I3S3R7
      Conserved Domains (2) summary
      cd15402
      Location:47 → 71
      7tmA_Mel1A; TM helix 1 [structural motif]
      cl28897
      Location:46 → 323
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials