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    FEM1C fem-1 homolog C [ Canis lupus familiaris (dog) ]

    Gene ID: 481437, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FEM1Cprovided by VGNC
    Official Full Name
    fem-1 homolog Cprovided by VGNC
    Primary source
    VGNC:VGNC:51719
    See related
    Ensembl:ENSCAFG00845011535
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See FEM1C in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 11 NC_051815.1 (5239025..5264290, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 11 NC_006593.4 (5397620..5422864, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 11 NC_049232.1 (5517087..5542313, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 11 NC_049271.1 (5194370..5219592, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 11 NC_049752.1 (5263388..5288834, complement)

    Chromosome 11 - NC_051815.1Genomic Context describing neighboring genes Neighboring gene GTP:AMP phosphotransferase AK3, mitochondrial-like Neighboring gene uncharacterized LOC119873853 Neighboring gene uncharacterized LOC102151249 Neighboring gene transmembrane protein 230-like Neighboring gene toll like receptor adaptor molecule 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein fem-1 homolog C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051815.1 Reference ROS_Cfam_1.0

      Range
      5239025..5264290 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038681198.1 → XP_038537126.1  protein fem-1 homolog C

      UniProtKB/TrEMBL
      A0A8C0QV22, A0A8C0RC45, A0A8I3NL53, A0A8I3NL63, A0A8P0N3H0
      Conserved Domains (4) summary
      PHA02876
      Location:164 → 568
      PHA02876; ankyrin repeat protein; Provisional
      COG0666
      Location:462 → 599
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:118 → 146
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:87 → 178
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_038681197.1 → XP_038537125.1  protein fem-1 homolog C

      UniProtKB/TrEMBL
      A0A8C0QV22, A0A8C0RC45, A0A8I3NL53, A0A8I3NL63, A0A8P0N3H0
      Related
      ENSCAFP00845016031.1, ENSCAFT00845020450.1
      Conserved Domains (4) summary
      PHA02876
      Location:164 → 568
      PHA02876; ankyrin repeat protein; Provisional
      COG0666
      Location:462 → 599
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:118 → 146
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:87 → 178
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_038681199.1 → XP_038537127.1  protein fem-1 homolog C

      UniProtKB/TrEMBL
      A0A8C0QV22, A0A8C0RC45, A0A8I3NL53, A0A8I3NL63, A0A8P0N3H0
      Conserved Domains (4) summary
      PHA02876
      Location:164 → 568
      PHA02876; ankyrin repeat protein; Provisional
      COG0666
      Location:462 → 599
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:118 → 146
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:87 → 178
      Ank_2; Ankyrin repeats (3 copies)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049271.1 Alternate UMICH_Zoey_3.1

      Range
      5194370..5219592 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038489799.1 → XP_038345727.1  protein fem-1 homolog C

      Conserved Domains (4) summary
      PHA02876
      Location:164 → 568
      PHA02876; ankyrin repeat protein; Provisional
      COG0666
      Location:462 → 599
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:118 → 146
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:87 → 178
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_038489798.1 → XP_038345726.1  protein fem-1 homolog C

      Conserved Domains (4) summary
      PHA02876
      Location:164 → 568
      PHA02876; ankyrin repeat protein; Provisional
      COG0666
      Location:462 → 599
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:118 → 146
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:87 → 178
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_038489800.1 → XP_038345728.1  protein fem-1 homolog C

      Conserved Domains (4) summary
      PHA02876
      Location:164 → 568
      PHA02876; ankyrin repeat protein; Provisional
      COG0666
      Location:462 → 599
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:118 → 146
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:87 → 178
      Ank_2; Ankyrin repeats (3 copies)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049752.1 Alternate UNSW_CanFamBas_1.0

      Range
      5263388..5288834 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038615730.1 → XP_038471658.1  protein fem-1 homolog C

      Conserved Domains (4) summary
      PHA02876
      Location:164 → 568
      PHA02876; ankyrin repeat protein; Provisional
      COG0666
      Location:462 → 599
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:118 → 146
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:87 → 178
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_038615729.1 → XP_038471657.1  protein fem-1 homolog C

      Conserved Domains (4) summary
      PHA02876
      Location:164 → 568
      PHA02876; ankyrin repeat protein; Provisional
      COG0666
      Location:462 → 599
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:118 → 146
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:87 → 178
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_038615731.1 → XP_038471659.1  protein fem-1 homolog C

      Conserved Domains (4) summary
      PHA02876
      Location:164 → 568
      PHA02876; ankyrin repeat protein; Provisional
      COG0666
      Location:462 → 599
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:118 → 146
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:87 → 178
      Ank_2; Ankyrin repeats (3 copies)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049232.1 Alternate UU_Cfam_GSD_1.0

      Range
      5517087..5542313 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038551842.1 → XP_038407770.1  protein fem-1 homolog C

      UniProtKB/TrEMBL
      A0A8C0QV22, A0A8C0RC45, A0A8I3NL53, A0A8I3NL63, A0A8P0N3H0
      Conserved Domains (4) summary
      PHA02876
      Location:164 → 568
      PHA02876; ankyrin repeat protein; Provisional
      COG0666
      Location:462 → 599
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:118 → 146
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:87 → 178
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_038551841.1 → XP_038407769.1  protein fem-1 homolog C

      UniProtKB/TrEMBL
      A0A8C0QV22, A0A8C0RC45, A0A8I3NL53, A0A8I3NL63, A0A8P0N3H0
      Conserved Domains (4) summary
      PHA02876
      Location:164 → 568
      PHA02876; ankyrin repeat protein; Provisional
      COG0666
      Location:462 → 599
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:118 → 146
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:87 → 178
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_038551843.1 → XP_038407771.1  protein fem-1 homolog C

      UniProtKB/TrEMBL
      A0A8C0QV22, A0A8C0RC45, A0A8I3NL53, A0A8I3NL63, A0A8P0N3H0
      Conserved Domains (4) summary
      PHA02876
      Location:164 → 568
      PHA02876; ankyrin repeat protein; Provisional
      COG0666
      Location:462 → 599
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:118 → 146
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:87 → 178
      Ank_2; Ankyrin repeats (3 copies)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006593.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      5397620..5422864 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038654764.1 → XP_038510692.1  protein fem-1 homolog C

      UniProtKB/TrEMBL
      A0A8C0QV22, A0A8C0RC45, A0A8I3NL53, A0A8I3NL63, A0A8P0N3H0
      Conserved Domains (4) summary
      PHA02876
      Location:164 → 568
      PHA02876; ankyrin repeat protein; Provisional
      COG0666
      Location:462 → 599
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:118 → 146
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:87 → 178
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_038654754.1 → XP_038510682.1  protein fem-1 homolog C

      UniProtKB/TrEMBL
      A0A8C0QV22, A0A8C0RC45, A0A8I3NL53, A0A8I3NL63, A0A8P0N3H0
      Conserved Domains (4) summary
      PHA02876
      Location:164 → 568
      PHA02876; ankyrin repeat protein; Provisional
      COG0666
      Location:462 → 599
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:118 → 146
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:87 → 178
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_038654769.1 → XP_038510697.1  protein fem-1 homolog C

      UniProtKB/TrEMBL
      A0A8C0QV22, A0A8C0RC45, A0A8I3NL53, A0A8I3NL63, A0A8P0N3H0
      Conserved Domains (4) summary
      PHA02876
      Location:164 → 568
      PHA02876; ankyrin repeat protein; Provisional
      COG0666
      Location:462 → 599
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:118 → 146
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:87 → 178
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
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