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    SEPTIN3 septin 3 [ Canis lupus familiaris (dog) ]

    Gene ID: 481227, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SEPTIN3provided by VGNC
    Official Full Name
    septin 3provided by VGNC
    Primary source
    VGNC:VGNC:49646
    See related
    Ensembl:ENSCAFG00845015350
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    SEPT3
    Orthologs
    human mouse all
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    Genomic context

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    See SEPTIN3 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (24115099..24141685, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (23304474..23331048, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (24327530..24354096, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (23832430..23855170, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (24153414..24179997, complement)

    Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene PH domain containing endocytic trafficking adaptor 2 Neighboring gene alpha-N-acetylgalactosaminidase Neighboring gene WBP2 N-terminal like Neighboring gene 40S ribosomal protein S15a-like Neighboring gene uncharacterized LOC111097640 Neighboring gene uncharacterized LOC102153105

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables molecular adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoskeleton-dependent cytokinesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell division site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in presynaptic cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of septin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in septin ring IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neuronal-specific septin-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051814.1 Reference ROS_Cfam_1.0

      Range
      24115099..24141685 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038679690.1 → XP_038535618.1  neuronal-specific septin-3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YZF5, A0A8I3NWQ2
      Conserved Domains (3) summary
      cd01850
      Location:496 → 770
      CDC_Septin; CDC/Septin GTPase family
      PHA03247
      Location:35 → 468
      PHA03247; large tegument protein UL36; Provisional
      pfam00695
      Location:16 → 236
      vMSA; Major surface antigen from hepadnavirus

    2. XM_038679689.1 → XP_038535617.1  neuronal-specific septin-3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YZF5, A0A8I3NWQ2
      Related
      ENSCAFP00845021675.1, ENSCAFT00845027549.1
      Conserved Domains (3) summary
      cd01850
      Location:496 → 770
      CDC_Septin; CDC/Septin GTPase family
      PHA03247
      Location:35 → 468
      PHA03247; large tegument protein UL36; Provisional
      pfam00695
      Location:16 → 236
      vMSA; Major surface antigen from hepadnavirus

    3. XM_038679691.1 → XP_038535619.1  neuronal-specific septin-3 isoform X2

      UniProtKB/TrEMBL
      A0A8C0YZF5
      Conserved Domains (3) summary
      cd01850
      Location:496 → 769
      CDC_Septin; CDC/Septin GTPase family
      PHA03247
      Location:35 → 468
      PHA03247; large tegument protein UL36; Provisional
      pfam00695
      Location:16 → 236
      vMSA; Major surface antigen from hepadnavirus

    4. XM_038679693.1 → XP_038535621.1  neuronal-specific septin-3 isoform X4

      Conserved Domains (1) summary
      cd01850
      Location:46 → 320
      CDC_Septin; CDC/Septin GTPase family

    5. XM_038679692.1 → XP_038535620.1  neuronal-specific septin-3 isoform X3

      UniProtKB/TrEMBL
      A0A8C0PBI8, A0A8I3NS66
      Related
      ENSCAFP00845021719.1, ENSCAFT00845027602.1
      Conserved Domains (1) summary
      cd01850
      Location:59 → 333
      CDC_Septin; CDC/Septin GTPase family

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049270.1 Alternate UMICH_Zoey_3.1

      Range
      23832430..23855170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038488451.1 → XP_038344379.1  neuronal-specific septin-3 isoform X6

    2. XM_038488450.1 → XP_038344378.1  neuronal-specific septin-3 isoform X5

    3. XM_038488453.1 → XP_038344381.1  neuronal-specific septin-3 isoform X4

      Conserved Domains (1) summary
      cd01850
      Location:46 → 320
      CDC_Septin; CDC/Septin GTPase family

    4. XM_038488452.1 → XP_038344380.1  neuronal-specific septin-3 isoform X3

      Conserved Domains (1) summary
      cd01850
      Location:59 → 333
      CDC_Septin; CDC/Septin GTPase family

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

      Range
      24153414..24179997 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038614343.1 → XP_038470271.1  neuronal-specific septin-3 isoform X1

    2. XM_038614344.1 → XP_038470272.1  neuronal-specific septin-3 isoform X1

    3. XM_038614345.1 → XP_038470273.1  neuronal-specific septin-3 isoform X2

    4. XM_038614347.1 → XP_038470275.1  neuronal-specific septin-3 isoform X4

      Conserved Domains (1) summary
      cd01850
      Location:46 → 320
      CDC_Septin; CDC/Septin GTPase family

    5. XM_038614346.1 → XP_038470274.1  neuronal-specific septin-3 isoform X3

      Conserved Domains (1) summary
      cd01850
      Location:59 → 333
      CDC_Septin; CDC/Septin GTPase family

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

      Range
      24327530..24354096 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038550375.1 → XP_038406303.1  neuronal-specific septin-3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YZF5, A0A8I3NWQ2
      Conserved Domains (3) summary
      cd01850
      Location:496 → 770
      CDC_Septin; CDC/Septin GTPase family
      PHA03247
      Location:35 → 468
      PHA03247; large tegument protein UL36; Provisional
      pfam00695
      Location:16 → 236
      vMSA; Major surface antigen from hepadnavirus

    2. XM_038550374.1 → XP_038406302.1  neuronal-specific septin-3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0YZF5, A0A8I3NWQ2
      Conserved Domains (3) summary
      cd01850
      Location:496 → 770
      CDC_Septin; CDC/Septin GTPase family
      PHA03247
      Location:35 → 468
      PHA03247; large tegument protein UL36; Provisional
      pfam00695
      Location:16 → 236
      vMSA; Major surface antigen from hepadnavirus

    3. XM_038550376.1 → XP_038406304.1  neuronal-specific septin-3 isoform X2

      UniProtKB/TrEMBL
      A0A8C0YZF5
      Conserved Domains (3) summary
      cd01850
      Location:496 → 769
      CDC_Septin; CDC/Septin GTPase family
      PHA03247
      Location:35 → 468
      PHA03247; large tegument protein UL36; Provisional
      pfam00695
      Location:16 → 236
      vMSA; Major surface antigen from hepadnavirus

    4. XM_038550378.1 → XP_038406306.1  neuronal-specific septin-3 isoform X4

      Conserved Domains (1) summary
      cd01850
      Location:46 → 320
      CDC_Septin; CDC/Septin GTPase family

    5. XM_038550377.1 → XP_038406305.1  neuronal-specific septin-3 isoform X3

      UniProtKB/TrEMBL
      A0A8C0PBI8, A0A8I3NS66
      Conserved Domains (1) summary
      cd01850
      Location:59 → 333
      CDC_Septin; CDC/Septin GTPase family

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      23304474..23331048 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014117312.3 → XP_013972787.1  neuronal-specific septin-3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0PMN8, A0A8C0YZF5, A0A8P0N476
      Conserved Domains (2) summary
      cd01850
      Location:496 → 770
      CDC_Septin; CDC/Septin GTPase family
      cl26464
      Location:35 → 468
      Atrophin-1; Atrophin-1 family

    2. XM_022424352.2 → XP_022280060.1  neuronal-specific septin-3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0PMN8, A0A8C0YZF5, A0A8P0N476
      Conserved Domains (2) summary
      cd01850
      Location:496 → 770
      CDC_Septin; CDC/Septin GTPase family
      cl26464
      Location:35 → 468
      Atrophin-1; Atrophin-1 family

    3. XM_014117313.3 → XP_013972788.1  neuronal-specific septin-3 isoform X2

      UniProtKB/TrEMBL
      A0A8C0YZF5
      Conserved Domains (3) summary
      cd01850
      Location:496 → 769
      CDC_Septin; CDC/Septin GTPase family
      COG5019
      Location:476 → 765
      CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
      cd11741
      Location:197 → 255
      TIN2_TBM; TRF-binding motif region of TRF-Interacting Nuclear factor 2

    4. XM_005625820.4 → XP_005625877.2  neuronal-specific septin-3 isoform X4

      Conserved Domains (1) summary
      cd01850
      Location:46 → 320
      CDC_Septin; CDC/Septin GTPase family

    5. XM_843889.6 → XP_848982.2  neuronal-specific septin-3 isoform X3

      See identical proteins and their annotated locations for XP_848982.2

      UniProtKB/TrEMBL
      A0A8C0PBI8, A0A8I3NS66
      Conserved Domains (1) summary
      cd01850
      Location:59 → 333
      CDC_Septin; CDC/Septin GTPase family
    Nucleotide Protein
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