U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    RPL17 ribosomal protein L17 [ Canis lupus familiaris (dog) ]

    Gene ID: 480221, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    RPL17
    Gene description
    ribosomal protein L17
    See related
    Ensembl:ENSCAFG00845016396
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    RPL17L
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RPL17 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 7 NC_051811.1 (79330969..79334939)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 7 NC_006589.4 (78669003..78672981)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 7 NC_049228.1 (79360996..79364974)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 7 NC_049267.1 (79046062..79050027)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 7 NC_049748.1 (79076136..79080109)

    Chromosome 7 - NC_051811.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119872624 Neighboring gene uncharacterized LOC119872625 Neighboring gene lipase G, endothelial type Neighboring gene small nucleolar RNA SNORD58 Neighboring gene small nucleolar RNA SNORD58 Neighboring gene small nucleolar RNA SNORD58 Neighboring gene chromosome 7 C18orf32 homolog Neighboring gene dymeclin Neighboring gene uncharacterized LOC111096838

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    60S ribosomal protein L17

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051811.1 Reference ROS_Cfam_1.0

      Range
      79330969..79334939
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038672789.1 → XP_038528717.1  60S ribosomal protein L17

      UniProtKB/TrEMBL
      A0A8C0R9Y9, A0A8C0SK31, A0A8I3S244
      Related
      ENSCAFP00845022945.1, ENSCAFT00845029177.1
      Conserved Domains (1) summary
      PTZ00178
      Location:1 → 165
      PTZ00178; 60S ribosomal protein L17; Provisional

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049267.1 Alternate UMICH_Zoey_3.1

      Range
      79046062..79050027
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038482513.1 → XP_038338441.1  60S ribosomal protein L17

      Conserved Domains (1) summary
      PTZ00178
      Location:1 → 165
      PTZ00178; 60S ribosomal protein L17; Provisional

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049748.1 Alternate UNSW_CanFamBas_1.0

      Range
      79076136..79080109
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038608081.1 → XP_038464009.1  60S ribosomal protein L17

      Conserved Domains (1) summary
      PTZ00178
      Location:1 → 165
      PTZ00178; 60S ribosomal protein L17; Provisional

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049228.1 Alternate UU_Cfam_GSD_1.0

      Range
      79360996..79364974
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038543982.1 → XP_038399910.1  60S ribosomal protein L17

      UniProtKB/TrEMBL
      A0A8C0R9Y9, A0A8C0SK31, A0A8I3S244
      Conserved Domains (1) summary
      PTZ00178
      Location:1 → 165
      PTZ00178; 60S ribosomal protein L17; Provisional

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006589.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      78669003..78672981
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005623128.4 → XP_005623185.2  60S ribosomal protein L17

      UniProtKB/TrEMBL
      A0A8C0R9Y9, A0A8C0SK31, A0A8I3S244
      Conserved Domains (1) summary
      PTZ00178
      Location:1 → 165
      PTZ00178; 60S ribosomal protein L17; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.