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    ARPC1B actin related protein 2/3 complex subunit 1B [ Canis lupus familiaris (dog) ]

    Gene ID: 479744, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ARPC1Bprovided by VGNC
    Official Full Name
    actin related protein 2/3 complex subunit 1Bprovided by VGNC
    Primary source
    VGNC:VGNC:38131
    See related
    Ensembl:ENSCAFG00845003541
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See ARPC1B in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (10192483..10205575, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (11819059..11832117, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (10274762..10287831, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (10062441..10075520, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (10040965..10054042, complement)

    Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2 Neighboring gene cleavage and polyadenylation specific factor 4 Neighboring gene BUD31 homolog Neighboring gene PDGFA associated protein 1 Neighboring gene actin related protein 2/3 complex subunit 1A Neighboring gene uncharacterized LOC119872157 Neighboring gene myosin heavy chain 16

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Arp2/3 complex-mediated actin nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Arp2/3 protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    actin-related protein 2/3 complex subunit 1B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051810.1 Reference ROS_Cfam_1.0

      Range
      10192483..10205575 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038668196.1 → XP_038524124.1  actin-related protein 2/3 complex subunit 1B

      UniProtKB/TrEMBL
      A0A8C0KP61, A0A8C0NDL7, A0A8C0S2D3, A0A8I3MVD4
      Related
      ENSCAFP00845005009.1, ENSCAFT00845006308.1
      Conserved Domains (2) summary
      sd00039
      Location:11 → 50
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:45 → 264
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049266.1 Alternate UMICH_Zoey_3.1

      Range
      10062441..10075520 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038478147.1 → XP_038334075.1  actin-related protein 2/3 complex subunit 1B

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

      Range
      10040965..10054042 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038603503.1 → XP_038459431.1  actin-related protein 2/3 complex subunit 1B

      Conserved Domains (2) summary
      sd00039
      Location:11 → 50
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:45 → 264
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

      Range
      10274762..10287831 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038539417.1 → XP_038395345.1  actin-related protein 2/3 complex subunit 1B

      UniProtKB/TrEMBL
      A0A8C0KP61, A0A8C0NDL7, A0A8C0S2D3, A0A8I3MVD4
      Conserved Domains (2) summary
      sd00039
      Location:11 → 50
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:45 → 264
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      11819059..11832117 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038539185.1 → XP_038395113.1  actin-related protein 2/3 complex subunit 1B

      UniProtKB/TrEMBL
      A0A8C0KP61, A0A8C0NDL7, A0A8C0S2D3, A0A8I3MVD4
      Conserved Domains (2) summary
      sd00039
      Location:11 → 50
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:45 → 264
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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