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    SESTD1 SEC14 and spectrin domain containing 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 478823, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SESTD1provided by VGNC
    Official Full Name
    SEC14 and spectrin domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:46050
    See related
    Ensembl:ENSCAFG00845026463
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See SESTD1 in Genome Data Viewer
    Location:
    chromosome: 36
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 36 NC_051840.1 (22808081..22950717, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 36 NC_006618.4 (22670052..22812345, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 36 NC_049257.1 (22989893..23132276, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 36 NC_049296.1 (22903707..23045993, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 36 NC_049777.1 (22867186..23009396, complement)

    Chromosome 36 - NC_051840.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119867846 Neighboring gene titin Neighboring gene uncharacterized LOC119867847 Neighboring gene coiled-coil domain containing 141 Neighboring gene uncharacterized LOC119867797 Neighboring gene uncharacterized LOC119867848

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    SEC14 domain and spectrin repeat-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051840.1 Reference ROS_Cfam_1.0

      Range
      22808081..22950717 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038447203.1 → XP_038303131.1  SEC14 domain and spectrin repeat-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0RRF3, A0A8C0T7F5
      Related
      ENSCAFP00845036632.1, ENSCAFT00845046672.1
      Conserved Domains (2) summary
      pfam13716
      Location:33 → 153
      CRAL_TRIO_2; Divergent CRAL/TRIO domain
      cl02488
      Location:273 → 478
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

    2. XM_038447204.1 → XP_038303132.1  SEC14 domain and spectrin repeat-containing protein 1 isoform X2

      Conserved Domains (2) summary
      pfam13716
      Location:33 → 153
      CRAL_TRIO_2; Divergent CRAL/TRIO domain
      cl02488
      Location:273 → 478
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049296.1 Alternate UMICH_Zoey_3.1

      Range
      22903707..23045993 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038521278.1 → XP_038377206.1  SEC14 domain and spectrin repeat-containing protein 1 isoform X1

      Conserved Domains (2) summary
      pfam13716
      Location:33 → 153
      CRAL_TRIO_2; Divergent CRAL/TRIO domain
      cl02488
      Location:273 → 478
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

    2. XM_038521279.1 → XP_038377207.1  SEC14 domain and spectrin repeat-containing protein 1 isoform X2

      Conserved Domains (2) summary
      pfam13716
      Location:33 → 153
      CRAL_TRIO_2; Divergent CRAL/TRIO domain
      cl02488
      Location:273 → 478
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049777.1 Alternate UNSW_CanFamBas_1.0

      Range
      22867186..23009396 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038649398.1 → XP_038505326.1  SEC14 domain and spectrin repeat-containing protein 1 isoform X1

      Conserved Domains (2) summary
      pfam13716
      Location:33 → 153
      CRAL_TRIO_2; Divergent CRAL/TRIO domain
      cl02488
      Location:273 → 478
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

    2. XM_038649399.1 → XP_038505327.1  SEC14 domain and spectrin repeat-containing protein 1 isoform X2

      Conserved Domains (2) summary
      pfam13716
      Location:33 → 153
      CRAL_TRIO_2; Divergent CRAL/TRIO domain
      cl02488
      Location:273 → 478
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049257.1 Alternate UU_Cfam_GSD_1.0

      Range
      22989893..23132276 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038584986.1 → XP_038440914.1  SEC14 domain and spectrin repeat-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0RRF3, A0A8C0T7F5
      Conserved Domains (2) summary
      pfam13716
      Location:33 → 153
      CRAL_TRIO_2; Divergent CRAL/TRIO domain
      cl02488
      Location:273 → 478
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

    2. XM_038584987.1 → XP_038440915.1  SEC14 domain and spectrin repeat-containing protein 1 isoform X2

      Conserved Domains (2) summary
      pfam13716
      Location:33 → 153
      CRAL_TRIO_2; Divergent CRAL/TRIO domain
      cl02488
      Location:273 → 478
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006618.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      22670052..22812345 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038463315.1 → XP_038319243.1  SEC14 domain and spectrin repeat-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0RRF3, A0A8C0T7F5
      Conserved Domains (2) summary
      pfam13716
      Location:33 → 153
      CRAL_TRIO_2; Divergent CRAL/TRIO domain
      cl02488
      Location:273 → 478
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

    2. XM_038463316.1 → XP_038319244.1  SEC14 domain and spectrin repeat-containing protein 1 isoform X2

      Conserved Domains (2) summary
      pfam13716
      Location:33 → 153
      CRAL_TRIO_2; Divergent CRAL/TRIO domain
      cl02488
      Location:273 → 478
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    Nucleotide Protein
    Heading Accession and Version

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