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    RANBP9 RAN binding protein 9 [ Canis lupus familiaris (dog) ]

    Gene ID: 478728, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RANBP9provided by VGNC
    Official Full Name
    RAN binding protein 9provided by VGNC
    Primary source
    VGNC:VGNC:49679
    See related
    Ensembl:ENSCAFG00845022601
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See RANBP9 in Genome Data Viewer
    Location:
    chromosome: 35
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 35 NC_051839.1 (13162205..13255421, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 35 NC_006617.4 (13013028..13106204, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 35 NC_049256.1 (14364136..14457283, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 35 NC_049295.1 (12987624..13080738, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 35 NC_049776.1 (13039167..13132244, complement)

    Chromosome 35 - NC_051839.1Genomic Context describing neighboring genes Neighboring gene sirtuin 5 Neighboring gene nucleolar protein 7 Neighboring gene mitochondrial calcium uniporter regulator 1 Neighboring gene uracil-DNA glycosylase-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ran-binding protein 9; LOW QUALITY PROTEIN: ran-binding protein 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051839.1 Reference ROS_Cfam_1.0

      Range
      13162205..13255421 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038446409.1 → XP_038302337.1  ran-binding protein 9

      UniProtKB/TrEMBL
      A0A8C0KIF8, A0A8I3PBT1
      Related
      ENSCAFP00845031316.1, ENSCAFT00845039992.1
      Conserved Domains (4) summary
      smart00667
      Location:374 → 407
      LisH; Lissencephaly type-1-like homology motif
      smart00757
      Location:625 → 717
      CRA; CT11-RanBPM
      cd12909
      Location:199 → 341
      SPRY_RanBP9_10; SPRY domain in Ran binding proteins 9 and 10
      pfam10607
      Location:413 → 467
      CLTH; CTLH/CRA C-terminal to LisH motif domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049295.1 Alternate UMICH_Zoey_3.1

      Range
      12987624..13080738 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038520562.1 → XP_038376490.1  LOW QUALITY PROTEIN: ran-binding protein 9

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049776.1 Alternate UNSW_CanFamBas_1.0

      Range
      13039167..13132244 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038648608.1 → XP_038504536.1  LOW QUALITY PROTEIN: ran-binding protein 9

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049256.1 Alternate UU_Cfam_GSD_1.0

      Range
      14364136..14457283 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038584198.1 → XP_038440126.1  ran-binding protein 9

      UniProtKB/TrEMBL
      A0A8C0KIF8

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006617.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      13013028..13106204 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022414477.2 → XP_022270185.2  LOW QUALITY PROTEIN: ran-binding protein 9

      UniProtKB/TrEMBL
      A0A8C0KIF8
      Conserved Domains (4) summary
      smart00667
      Location:372 → 405
      LisH; Lissencephaly type-1-like homology motif
      smart00757
      Location:623 → 715
      CRA; CT11-RanBPM
      cd12909
      Location:197 → 339
      SPRY_RanBP9_10; SPRY domain in Ran binding proteins 9 and 10
      pfam10607
      Location:411 → 465
      CLTH; CTLH/CRA C-terminal to LisH motif domain
    Nucleotide Protein
    Heading Accession and Version

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