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    STMN2 stathmin 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 477918, updated on 17-Aug-2024

    Summary

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    Official Symbol
    STMN2provided by VGNC
    Official Full Name
    stathmin 2provided by VGNC
    Primary source
    VGNC:VGNC:46926
    See related
    Ensembl:ENSCAFG00845029665
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See STMN2 in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 29 NC_051833.1 (27179142..27228977)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 29 NC_006611.4 (27329341..27379157)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 29 NC_049250.1 (27620016..27669831)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 29 NC_049289.1 (27224785..27274552)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 29 NC_049770.1 (27263476..27313267)

    Chromosome 29 - NC_051833.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119866718 Neighboring gene uncharacterized LOC111093175 Neighboring gene uncharacterized LOC111093209 Neighboring gene U6 spliceosomal RNA Neighboring gene tigger transposable element-derived protein 1-like Neighboring gene hes related family bHLH transcription factor with YRPW motif 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tubulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule depolymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron projection development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of microtubule polymerization or depolymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in growth cone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    stathmin-2
    Names
    stathmin-like 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051833.1 Reference ROS_Cfam_1.0

      Range
      27179142..27228977
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038441443.1 → XP_038297371.1  stathmin-2

      UniProtKB/TrEMBL
      A0A8C0N0K4, A0A8C0T155, A0A8I3Q724
      Related
      ENSCAFP00845041228.1, ENSCAFT00845052539.1
      Conserved Domains (1) summary
      pfam00836
      Location:39 → 174
      Stathmin; Stathmin family

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049289.1 Alternate UMICH_Zoey_3.1

      Range
      27224785..27274552
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038516020.1 → XP_038371948.1  stathmin-2

      Conserved Domains (1) summary
      pfam00836
      Location:39 → 174
      Stathmin; Stathmin family

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049770.1 Alternate UNSW_CanFamBas_1.0

      Range
      27263476..27313267
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038643830.1 → XP_038499758.1  stathmin-2

      Conserved Domains (1) summary
      pfam00836
      Location:39 → 174
      Stathmin; Stathmin family

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049250.1 Alternate UU_Cfam_GSD_1.0

      Range
      27620016..27669831
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038579579.1 → XP_038435507.1  stathmin-2

      UniProtKB/TrEMBL
      A0A8C0N0K4, A0A8C0T155, A0A8I3Q724
      Conserved Domains (1) summary
      pfam00836
      Location:39 → 174
      Stathmin; Stathmin family

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006611.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      27329341..27379157
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_855591.6 → XP_860684.1  stathmin-2

      See identical proteins and their annotated locations for XP_860684.1

      UniProtKB/TrEMBL
      A0A8C0N0K4, A0A8C0T155, A0A8I3Q724
      Conserved Domains (1) summary
      pfam00836
      Location:39 → 174
      Stathmin; Stathmin family
    Nucleotide Protein
    Heading Accession and Version

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