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    TPI1 triosephosphate isomerase 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 477711, updated on 17-Aug-2024

    Summary

    Official Symbol
    TPI1provided by VGNC
    Official Full Name
    triosephosphate isomerase 1provided by VGNC
    Primary source
    VGNC:VGNC:47740
    See related
    Ensembl:ENSCAFG00845027022
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    TIM
    Orthologs
    NEW
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    Genomic context

    See TPI1 in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (38507407..38510797, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (8458847..8462228)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (7937580..7940961)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (38381481..38384861, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (38422508..38425888, complement)

    Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene enolase 2 Neighboring gene leucine rich repeat containing 23 Neighboring gene splA/ryanodine receptor domain and SOCS box containing 2 Neighboring gene ubiquitin specific peptidase 5 Neighboring gene cell division cycle associated 3 Neighboring gene G protein subunit beta 3

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables triose-phosphate isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in gluconeogenesis IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in glyceraldehyde-3-phosphate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in glycerol catabolic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in glycolytic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    triosephosphate isomerase
    Names
    methylglyoxal synthase
    triose-phosphate isomerase
    NP_001183983.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001197054.1NP_001183983.1  triosephosphate isomerase

      See identical proteins and their annotated locations for NP_001183983.1

      Status: VALIDATED

      Source sequence(s)
      JAAUVH010000362
      UniProtKB/Swiss-Prot
      P54714
      UniProtKB/TrEMBL
      A0A346M2B2, A0A8C0QUG9, A0A8C0RQN7, A0A8I3PRM7
      Related
      ENSCAFP00845037535.1, ENSCAFT00845047845.1
      Conserved Domains (1) summary
      PTZ00333
      Location:2247
      PTZ00333; triosephosphate isomerase; Provisional

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051831.1 Reference ROS_Cfam_1.0

      Range
      38507407..38510797 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049287.1 Alternate UMICH_Zoey_3.1

      Range
      38381481..38384861 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

      Range
      38422508..38425888 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

      Range
      7937580..7940961
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      8458847..8462228
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)