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    LDHB lactate dehydrogenase B [ Canis lupus familiaris (dog) ]

    Gene ID: 477675, updated on 5-Mar-2024

    Summary

    Gene symbol
    LDHB
    Gene description
    lactate dehydrogenase B
    See related
    Ensembl:ENSCAFG00845014696
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
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    Genomic context

    See LDHB in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (25693648..25716172)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (20864321..20886793, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (21035083..21057566, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (25492290..25514750)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (25515724..25538195)

    Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily C member 9 Neighboring gene potassium inwardly rectifying channel subfamily J member 8 Neighboring gene glycogen synthase 2 Neighboring gene spexin hormone

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-lactate dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in carboxylic acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    L-lactate dehydrogenase B chain
    NP_001239093.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001252164.1NP_001239093.1  L-lactate dehydrogenase B chain

      See identical proteins and their annotated locations for NP_001239093.1

      Status: VALIDATED

      Source sequence(s)
      CO584462, DN434255, DN876290
      UniProtKB/TrEMBL
      A0A8C0K415, A0A8C0RBP6, A0A8C0Z6I0, A0A8I3NY38
      Related
      ENSCAFP00845020730.1, ENSCAFT00845026294.1
      Conserved Domains (1) summary
      cd05293
      Location:20330
      LDH_1; A subgroup of L-lactate dehydrogenases

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051831.1 Reference ROS_Cfam_1.0

      Range
      25693648..25716172
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049287.1 Alternate UMICH_Zoey_3.1

      Range
      25492290..25514750
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

      Range
      25515724..25538195
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

      Range
      21035083..21057566 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      20864321..20886793 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)