U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    ASIC1 acid sensing ion channel subunit 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 477612, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ASIC1provided by VGNC
    Official Full Name
    acid sensing ion channel subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:38177
    See related
    Ensembl:ENSCAFG00845017786
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    ACCN2
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ASIC1 in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (4687973..4712419, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (41594907..41619336)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (41989720..42014370)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (4652821..4677403, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (4642373..4667009, complement)

    Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119866368 Neighboring gene glycerol-3-phosphate dehydrogenase 1 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 Neighboring gene Rac GTPase activating protein 1 Neighboring gene uncharacterized LOC111092823 Neighboring gene aquaporin 6

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    acid-sensing ion channel 1; LOW QUALITY PROTEIN: acid-sensing ion channel 1
    Names
    acid-sensing (proton-gated) ion channel 1
    amiloride-sensitive cation channel 2, neuronal

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051831.1 Reference ROS_Cfam_1.0

      Range
      4687973..4712419 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038438211.1 → XP_038294139.1  acid-sensing ion channel 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KNW0, A0A8C0TKH4, A0A8I3S043
      Related
      ENSCAFP00845024707.1, ENSCAFT00845031562.1
      Conserved Domains (1) summary
      TIGR00859
      Location:19 → 508
      ENaC; sodium channel transporter

    2. XM_038438210.1 → XP_038294138.1  acid-sensing ion channel 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0Z533, A0A8I3NUI9, A0A8P0PS28
      Related
      ENSCAFP00845024654.1, ENSCAFT00845031484.1
      Conserved Domains (1) summary
      cl02990
      Location:63 → 541
      ASC; Amiloride-sensitive sodium channel

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049287.1 Alternate UMICH_Zoey_3.1

      Range
      4652821..4677403 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038512912.1 → XP_038368840.1  LOW QUALITY PROTEIN: acid-sensing ion channel 1 isoform X2

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

      Range
      4642373..4667009 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038640695.1 → XP_038496623.1  acid-sensing ion channel 1 isoform X2

      Conserved Domains (1) summary
      TIGR00859
      Location:19 → 508
      ENaC; sodium channel transporter

    2. XM_038640693.1 → XP_038496621.1  acid-sensing ion channel 1 isoform X1

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

      Range
      41989720..42014370
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038577620.1 → XP_038433548.1  acid-sensing ion channel 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KNW0, A0A8C0TKH4, A0A8I3S043
      Conserved Domains (1) summary
      TIGR00859
      Location:19 → 508
      ENaC; sodium channel transporter

    2. XM_038577619.1 → XP_038433547.1  acid-sensing ion channel 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0Z533

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      41594907..41619336
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_845307.6 → XP_850400.3  acid-sensing ion channel 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0KNW0, A0A8C0TKH4, A0A8I3S043
      Conserved Domains (1) summary
      TIGR00859
      Location:19 → 508
      ENaC; sodium channel transporter

    2. XM_005636861.4 → XP_005636918.2  acid-sensing ion channel 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0Z533, A0A8I3NUI9, A0A8P0PS28
      Conserved Domains (1) summary
      cl02990
      Location:63 → 541
      ASC; Amiloride-sensitive sodium channel
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.