U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    RAB30 RAB30, member RAS oncogene family [ Canis lupus familiaris (dog) ]

    Gene ID: 476787, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    RAB30provided by VGNC
    Official Full Name
    RAB30, member RAS oncogene familyprovided by VGNC
    Primary source
    VGNC:VGNC:45273
    See related
    Ensembl:ENSCAFG00845012071
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RAB30 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 21 NC_051825.1 (16286422..16375822)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 21 NC_006603.4 (15975905..16065004)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 21 NC_049242.1 (16211714..16300968)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 21 NC_049281.1 (16062037..16150827)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 21 NC_049762.1 (16141386..16230836)

    Chromosome 21 - NC_051825.1Genomic Context describing neighboring genes Neighboring gene PCF11 cleavage and polyadenylation factor subunit Neighboring gene uncharacterized LOC111091511 Neighboring gene DNA damage induced apoptosis suppressor Neighboring gene prolylcarboxypeptidase Neighboring gene 60S ribosomal protein L23a-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Rab protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    ras-related protein Rab-30

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051825.1 Reference ROS_Cfam_1.0

      Range
      16286422..16375822
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038429942.1 → XP_038285870.1  ras-related protein Rab-30

      UniProtKB/TrEMBL
      A0A8C0KZP3, A0A8C0M5X7, A0A8I3RZ55
      Related
      ENSCAFP00845016870.1, ENSCAFT00845021466.1
      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    2. XM_038429943.1 → XP_038285871.1  ras-related protein Rab-30

      UniProtKB/TrEMBL
      A0A8C0KZP3, A0A8C0M5X7, A0A8I3RZ55
      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    3. XM_038429944.1 → XP_038285872.1  ras-related protein Rab-30

      UniProtKB/TrEMBL
      A0A8C0KZP3, A0A8C0M5X7, A0A8I3RZ55
      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    4. XM_038429945.1 → XP_038285873.1  ras-related protein Rab-30

      UniProtKB/TrEMBL
      A0A8C0KZP3, A0A8C0M5X7, A0A8I3RZ55
      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049281.1 Alternate UMICH_Zoey_3.1

      Range
      16062037..16150827
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038505319.1 → XP_038361247.1  ras-related protein Rab-30

      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    2. XM_038505320.1 → XP_038361248.1  ras-related protein Rab-30

      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    3. XM_038505321.1 → XP_038361249.1  ras-related protein Rab-30

      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    4. XM_038505322.1 → XP_038361250.1  ras-related protein Rab-30

      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049762.1 Alternate UNSW_CanFamBas_1.0

      Range
      16141386..16230836
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038632622.1 → XP_038488550.1  ras-related protein Rab-30

      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    2. XM_038632623.1 → XP_038488551.1  ras-related protein Rab-30

      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    3. XM_038632624.1 → XP_038488552.1  ras-related protein Rab-30

      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    4. XM_038632625.1 → XP_038488553.1  ras-related protein Rab-30

      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049242.1 Alternate UU_Cfam_GSD_1.0

      Range
      16211714..16300968
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038568476.1 → XP_038424404.1  ras-related protein Rab-30

      UniProtKB/TrEMBL
      A0A8C0KZP3, A0A8C0M5X7, A0A8I3RZ55
      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    2. XM_038568477.1 → XP_038424405.1  ras-related protein Rab-30

      UniProtKB/TrEMBL
      A0A8C0KZP3, A0A8C0M5X7, A0A8I3RZ55
      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    3. XM_038568478.1 → XP_038424406.1  ras-related protein Rab-30

      UniProtKB/TrEMBL
      A0A8C0KZP3, A0A8C0M5X7, A0A8I3RZ55
      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    4. XM_038568479.1 → XP_038424407.1  ras-related protein Rab-30

      UniProtKB/TrEMBL
      A0A8C0KZP3, A0A8C0M5X7, A0A8I3RZ55
      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006603.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      15975905..16065004
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005633430.4 → XP_005633487.1  ras-related protein Rab-30

      See identical proteins and their annotated locations for XP_005633487.1

      UniProtKB/TrEMBL
      A0A8C0KZP3, A0A8C0M5X7, A0A8I3RZ55
      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    2. XM_005633431.4 → XP_005633488.1  ras-related protein Rab-30

      See identical proteins and their annotated locations for XP_005633488.1

      UniProtKB/TrEMBL
      A0A8C0KZP3, A0A8C0M5X7, A0A8I3RZ55
      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    3. XM_022407587.2 → XP_022263295.1  ras-related protein Rab-30

      UniProtKB/TrEMBL
      A0A8C0KZP3, A0A8C0M5X7, A0A8I3RZ55
      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)

    4. XM_038456449.1 → XP_038312377.1  ras-related protein Rab-30

      UniProtKB/TrEMBL
      A0A8C0KZP3, A0A8C0M5X7, A0A8I3RZ55
      Conserved Domains (1) summary
      cd04114
      Location:3 → 171
      Rab30; Rab GTPase family 30 (Rab30)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.