U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    DNAJB1 DnaJ heat shock protein family (Hsp40) member B1 [ Canis lupus familiaris (dog) ]

    Gene ID: 476688, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    DNAJB1provided by VGNC
    Official Full Name
    DnaJ heat shock protein family (Hsp40) member B1provided by VGNC
    Primary source
    VGNC:VGNC:54594
    See related
    Ensembl:ENSCAFG00845022007
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See DNAJB1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (48637524..48648012)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (47997072..48007556)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (48520662..48531368)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (47851456..47861943)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (48277833..48288317)

    Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit B7 Neighboring gene trans-2,3-enoyl-CoA reductase Neighboring gene GIPC PDZ domain containing family member 1 Neighboring gene prostaglandin E receptor 1 Neighboring gene protein kinase N1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables Hsp70 protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chaperone cofactor-dependent protein refolding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    dnaJ homolog subfamily B member 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051824.1 Reference ROS_Cfam_1.0

      Range
      48637524..48648012
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038428372.1 → XP_038284300.1  dnaJ homolog subfamily B member 1 isoform X2

      Conserved Domains (1) summary
      cd10747
      Location:62 → 226
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40

    2. XM_038428373.1 → XP_038284301.1  dnaJ homolog subfamily B member 1 isoform X2

      Conserved Domains (1) summary
      cd10747
      Location:62 → 226
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40

    3. XM_038428371.1 → XP_038284299.1  dnaJ homolog subfamily B member 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0K0R6, A0A8C0PGB1, A0A8I3PMR7
      Related
      ENSCAFP00845030402.1, ENSCAFT00845038820.1
      Conserved Domains (1) summary
      COG0484
      Location:1 → 340
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049280.1 Alternate UMICH_Zoey_3.1

      Range
      47851456..47861943
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038504015.1 → XP_038359943.1  dnaJ homolog subfamily B member 1 isoform X2

      Conserved Domains (1) summary
      cd10747
      Location:62 → 226
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40

    2. XM_038504016.1 → XP_038359944.1  dnaJ homolog subfamily B member 1 isoform X2

      Conserved Domains (1) summary
      cd10747
      Location:62 → 226
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40

    3. XM_038504014.1 → XP_038359942.1  dnaJ homolog subfamily B member 1 isoform X1

      Conserved Domains (1) summary
      COG0484
      Location:1 → 340
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

      Range
      48277833..48288317
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038631183.1 → XP_038487111.1  dnaJ homolog subfamily B member 1 isoform X2

      Conserved Domains (1) summary
      cd10747
      Location:62 → 226
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40

    2. XM_038631184.1 → XP_038487112.1  dnaJ homolog subfamily B member 1 isoform X2

      Conserved Domains (1) summary
      cd10747
      Location:62 → 226
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40

    3. XM_038631182.1 → XP_038487110.1  dnaJ homolog subfamily B member 1 isoform X1

      Conserved Domains (1) summary
      COG0484
      Location:1 → 340
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

      Range
      48520662..48531368
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038567038.1 → XP_038422966.1  dnaJ homolog subfamily B member 1 isoform X2

      Conserved Domains (1) summary
      cd10747
      Location:62 → 226
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40

    2. XM_038567039.1 → XP_038422967.1  dnaJ homolog subfamily B member 1 isoform X2

      Conserved Domains (1) summary
      cd10747
      Location:62 → 226
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40

    3. XM_038567037.1 → XP_038422965.1  dnaJ homolog subfamily B member 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0K0R6, A0A8C0PGB1, A0A8I3PMR7
      Conserved Domains (1) summary
      COG0484
      Location:1 → 340
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      47997072..48007556
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014122027.2 → XP_013977502.1  dnaJ homolog subfamily B member 1 isoform X2

      Conserved Domains (1) summary
      cd10747
      Location:62 → 226
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40

    2. XM_038455037.1 → XP_038310965.1  dnaJ homolog subfamily B member 1 isoform X2

      Conserved Domains (1) summary
      cd10747
      Location:62 → 226
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40

    3. XM_847807.6 → XP_852900.1  dnaJ homolog subfamily B member 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0K0R6, A0A8C0PGB1, A0A8I3PMR7
      Conserved Domains (1) summary
      COG0484
      Location:1 → 340
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.