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    CCDC93 coiled-coil domain containing 93 [ Canis lupus familiaris (dog) ]

    Gene ID: 476119, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CCDC93provided by VGNC
    Official Full Name
    coiled-coil domain containing 93provided by VGNC
    Primary source
    VGNC:VGNC:38874
    See related
    Ensembl:ENSCAFG00845006007
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See CCDC93 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 19 NC_051823.1 (33273242..33366927)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 19 NC_006601.4 (32146554..32242171)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 19 NC_049240.1 (33304962..33400474)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 19 NC_049279.1 (31947665..32043081)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 19 NC_049760.1 (32117919..32213555)

    Chromosome 19 - NC_051823.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102151623 Neighboring gene insulin induced gene 2 Neighboring gene U4 spliceosomal RNA Neighboring gene 5-hydroxytryptamine receptor 5B-like Neighboring gene DEAD-box helicase 18

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in Golgi to plasma membrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coiled-coil domain-containing protein 93

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051823.1 Reference ROS_Cfam_1.0

      Range
      33273242..33366927
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038425581.1 → XP_038281509.1  coiled-coil domain-containing protein 93 isoform X1

      UniProtKB/TrEMBL
      A0A8I3MQY3, A0A8P0T0S7
      Related
      ENSCAFP00845008304.1, ENSCAFT00845010652.1
      Conserved Domains (2) summary
      COG1196
      Location:231 → 585
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam09762
      Location:31 → 206
      KOG2701; Coiled-coil domain-containing protein (DUF2037)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049279.1 Alternate UMICH_Zoey_3.1

      Range
      31947665..32043081
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038502271.1 → XP_038358199.1  coiled-coil domain-containing protein 93 isoform X2

    2. XM_038502272.1 → XP_038358200.1  coiled-coil domain-containing protein 93 isoform X3

    3. XM_038502273.1 → XP_038358201.1  coiled-coil domain-containing protein 93 isoform X4

    RNA

    1. XR_005340350.1 RNA Sequence

    2. XR_005340351.1 RNA Sequence

    3. XR_005340352.1 RNA Sequence

    4. XR_005340353.1 RNA Sequence

    5. XR_005340354.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049760.1 Alternate UNSW_CanFamBas_1.0

      Range
      32117919..32213555
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038629074.1 → XP_038485002.1  coiled-coil domain-containing protein 93 isoform X5

    2. XM_038629075.1 → XP_038485003.1  coiled-coil domain-containing protein 93 isoform X6

    3. XM_038629076.1 → XP_038485004.1  coiled-coil domain-containing protein 93 isoform X7

    RNA

    1. XR_005408143.1 RNA Sequence

    2. XR_005408144.1 RNA Sequence

    3. XR_005408145.1 RNA Sequence

    4. XR_005408146.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049240.1 Alternate UU_Cfam_GSD_1.0

      Range
      33304962..33400474
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038564985.1 → XP_038420913.1  coiled-coil domain-containing protein 93 isoform X8

      UniProtKB/TrEMBL
      A0A8C0QF65, A0A8C0QFM7, A0A8P0SAI6

    2. XM_038564986.1 → XP_038420914.1  coiled-coil domain-containing protein 93 isoform X9

      UniProtKB/TrEMBL
      A0A8C0QI28, A0A8C0R0P4, A0A8P0T0S7, A0A8P0TS40

    3. XM_038564987.1 → XP_038420915.1  coiled-coil domain-containing protein 93 isoform X10

      UniProtKB/TrEMBL
      A0A8P0T0S7

    RNA

    1. XR_005374113.1 RNA Sequence

    2. XR_005374114.1 RNA Sequence

    3. XR_005374115.1 RNA Sequence

    4. XR_005374116.1 RNA Sequence

    5. XR_005374117.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006601.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      32146554..32242171
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005631918.4 → XP_005631975.1  coiled-coil domain-containing protein 93 isoform X11

      UniProtKB/TrEMBL
      A0A8C0QF65, A0A8C0QFM7, A0A8P0SAI6
      Conserved Domains (2) summary
      pfam09762
      Location:29 → 206
      KOG2701; Coiled-coil domain-containing protein (DUF2037)
      cl25732
      Location:297 → 624
      SMC_N; RecF/RecN/SMC N terminal domain

    2. XM_533326.8 → XP_533326.4  coiled-coil domain-containing protein 93 isoform X12

      UniProtKB/TrEMBL
      A0A8C0QI28, A0A8C0R0P4, A0A8P0T0S7, A0A8P0TS40
      Conserved Domains (2) summary
      pfam09762
      Location:29 → 206
      KOG2701; Coiled-coil domain-containing protein (DUF2037)
      cl25732
      Location:291 → 618
      SMC_N; RecF/RecN/SMC N terminal domain

    3. XM_005631919.4 → XP_005631976.1  coiled-coil domain-containing protein 93 isoform X13

      UniProtKB/TrEMBL
      A0A8P0T0S7
      Conserved Domains (2) summary
      pfam09762
      Location:29 → 206
      KOG2701; Coiled-coil domain-containing protein (DUF2037)
      cl25732
      Location:229 → 617
      SMC_N; RecF/RecN/SMC N terminal domain

    RNA

    1. XR_002616341.2 RNA Sequence

    2. XR_005312050.1 RNA Sequence

    3. XR_002616342.2 RNA Sequence

    4. XR_002616343.2 RNA Sequence

    Nucleotide Protein
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