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    SLC4A2 solute carrier family 4 member 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 475538, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC4A2provided by VGNC
    Official Full Name
    solute carrier family 4 member 2provided by VGNC
    Primary source
    VGNC:VGNC:46432
    See related
    Ensembl:ENSCAFG00845009099
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See SLC4A2 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 16 NC_051820.1 (16833273..16848983)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 16 NC_006598.4 (15719293..15734862)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 16 NC_049237.1 (15837873..15853424)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 16 NC_049276.1 (15205711..15221294)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 16 NC_049757.1 (15787162..15802688)

    Chromosome 16 - NC_051820.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily B member 8 Neighboring gene acid sensing ion channel subunit 3 Neighboring gene cyclin dependent kinase 5 Neighboring gene Fas activated serine/threonine kinase Neighboring gene transmembrane and ubiquitin like domain containing 1 Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 Neighboring gene translation initiation factor IF-2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables monoatomic anion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables solute:inorganic anion antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in bicarbonate transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic anion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of intracellular pH IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apical plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in basolateral plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    anion exchange protein 2
    Names
    solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051820.1 Reference ROS_Cfam_1.0

      Range
      16833273..16848983
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038689488.1 → XP_038545416.1  anion exchange protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0K1V5, A0A8C0QER3, A0A8I3RWK2
      Related
      ENSCAFP00845012490.1, ENSCAFT00845016062.1
      Conserved Domains (1) summary
      TIGR00834
      Location:319 → 1235
      ae; anion exchange protein

    2. XM_038689489.1 → XP_038545417.1  anion exchange protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0QER3, A0A8I3RWK2
      Related
      ENSCAFP00845012828.1, ENSCAFT00845016494.1
      Conserved Domains (1) summary
      TIGR00834
      Location:310 → 1226
      ae; anion exchange protein

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049276.1 Alternate UMICH_Zoey_3.1

      Range
      15205711..15221294
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038497303.1 → XP_038353231.1  anion exchange protein 2 isoform X1

      Conserved Domains (1) summary
      TIGR00834
      Location:319 → 1235
      ae; anion exchange protein

    2. XM_038497304.1 → XP_038353232.1  anion exchange protein 2 isoform X2

      Conserved Domains (1) summary
      TIGR00834
      Location:310 → 1226
      ae; anion exchange protein

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049757.1 Alternate UNSW_CanFamBas_1.0

      Range
      15787162..15802688
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038623723.1 → XP_038479651.1  anion exchange protein 2 isoform X1

    2. XM_038623724.1 → XP_038479652.1  anion exchange protein 2 isoform X2

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049237.1 Alternate UU_Cfam_GSD_1.0

      Range
      15837873..15853424
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038559728.1 → XP_038415656.1  anion exchange protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0QER3, A0A8I3RWK2

    2. XM_038559729.1 → XP_038415657.1  anion exchange protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0QER3, A0A8I3RWK2

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006598.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      15719293..15734862
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003639553.5 → XP_003639601.1  anion exchange protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0K1V5, A0A8C0QER3, A0A8I3RWK2
      Conserved Domains (1) summary
      TIGR00834
      Location:319 → 1235
      ae; anion exchange protein

    2. XM_532761.6 → XP_532761.4  anion exchange protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0QER3, A0A8I3RWK2
      Conserved Domains (1) summary
      TIGR00834
      Location:310 → 1226
      ae; anion exchange protein
    Nucleotide Protein
    Heading Accession and Version

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