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    ATP6V1F ATPase H+ transporting V1 subunit F [ Canis lupus familiaris (dog) ]

    Gene ID: 475199, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ATP6V1Fprovided by VGNC
    Official Full Name
    ATPase H+ transporting V1 subunit Fprovided by VGNC
    Primary source
    VGNC:VGNC:38282
    See related
    Ensembl:ENSCAFG00845022337
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See ATP6V1F in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 14 NC_051818.1 (7552723..7555466, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 14 NC_006596.4 (7473699..7476441, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 14 NC_049235.1 (7645178..7647919, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 14 NC_049274.1 (7757752..7760490, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 14 NC_049755.1 (7499763..7502507, complement)

    Chromosome 14 - NC_051818.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(VII) chain-like Neighboring gene uncharacterized LOC102151199 Neighboring gene sperm microtubule inner protein 1 Neighboring gene uncharacterized LOC119866516 Neighboring gene filamin C Neighboring gene coiled-coil domain containing 136

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables proton-transporting ATPase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of proton-transporting V-type ATPase, V1 domain IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    V-type proton ATPase subunit F
    XP_005628469.1
    XP_038350202.1
    XP_038412501.1
    XP_038476431.1
    XP_038542118.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051818.1 Reference ROS_Cfam_1.0

      Range
      7552723..7555466 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038686190.1 → XP_038542118.1  V-type proton ATPase subunit F

      UniProtKB/TrEMBL
      A0A8C0PFQ2, A0A8C0R5W1, A0A8I3PF77
      Related
      ENSCAFP00845030888.1, ENSCAFT00845039417.1
      Conserved Domains (1) summary
      TIGR01101
      Location:1 → 115
      V_ATP_synt_F; vacuolar ATP synthase F subunit

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049274.1 Alternate UMICH_Zoey_3.1

      Range
      7757752..7760490 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038494274.1 → XP_038350202.1  V-type proton ATPase subunit F

      Conserved Domains (1) summary
      TIGR01101
      Location:1 → 115
      V_ATP_synt_F; vacuolar ATP synthase F subunit

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049755.1 Alternate UNSW_CanFamBas_1.0

      Range
      7499763..7502507 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038620503.1 → XP_038476431.1  V-type proton ATPase subunit F

      Conserved Domains (1) summary
      TIGR01101
      Location:1 → 115
      V_ATP_synt_F; vacuolar ATP synthase F subunit

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049235.1 Alternate UU_Cfam_GSD_1.0

      Range
      7645178..7647919 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038556573.1 → XP_038412501.1  V-type proton ATPase subunit F

      UniProtKB/TrEMBL
      A0A8C0PFQ2, A0A8C0R5W1, A0A8I3PF77
      Conserved Domains (1) summary
      TIGR01101
      Location:1 → 115
      V_ATP_synt_F; vacuolar ATP synthase F subunit

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006596.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      7473699..7476441 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005628412.3 → XP_005628469.1  V-type proton ATPase subunit F

      UniProtKB/TrEMBL
      A0A8C0PFQ2, A0A8C0R5W1, A0A8I3PF77
      Conserved Domains (1) summary
      TIGR01101
      Location:1 → 115
      V_ATP_synt_F; vacuolar ATP synthase F subunit
    Nucleotide Protein
    Heading Accession and Version

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