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    NT5DC1 5'-nucleotidase domain containing 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 475036, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NT5DC1provided by VGNC
    Official Full Name
    5'-nucleotidase domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:54336
    See related
    Ensembl:ENSCAFG00845021137
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 12
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 12 NC_051816.1 (72672270..72791171)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 12 NC_006594.4 (71550833..71670015)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 12 NC_049233.1 (72254898..72373702)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 12 NC_049272.1 (72024246..72143173)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 12 NC_049753.1 (71866027..71984731)

    Chromosome 12 - NC_051816.1Genomic Context describing neighboring genes Neighboring gene fyn related Src family tyrosine kinase Neighboring gene ATP synthase subunit d, mitochondrial-like Neighboring gene spliceosome-associated protein CWC15 homolog Neighboring gene collagen type X alpha 1 chain Neighboring gene uncharacterized LOC111098412 Neighboring gene TSPY like 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 5'-nucleotidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    5'-nucleotidase domain-containing protein 1; LOW QUALITY PROTEIN: 5'-nucleotidase domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051816.1 Reference ROS_Cfam_1.0

      Range
      72672270..72791171
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038684448.1 → XP_038540376.1  5'-nucleotidase domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0M8I3, A0A8C0S8E5, A0A8I3PAA2
      Related
      ENSCAFP00845029220.1, ENSCAFT00845037305.1
      Conserved Domains (1) summary
      cl21460
      Location:3 → 337
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    2. XM_038684449.1 → XP_038540377.1  5'-nucleotidase domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0M8I3
      Conserved Domains (1) summary
      cl21460
      Location:3 → 336
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049272.1 Alternate UMICH_Zoey_3.1

      Range
      72024246..72143173
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038492695.1 → XP_038348623.1  5'-nucleotidase domain-containing protein 1 isoform X1

      Conserved Domains (1) summary
      cl21460
      Location:3 → 337
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    2. XM_038492696.1 → XP_038348624.1  5'-nucleotidase domain-containing protein 1 isoform X2

      Conserved Domains (1) summary
      cl21460
      Location:3 → 336
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049753.1 Alternate UNSW_CanFamBas_1.0

      Range
      71866027..71984731
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038618892.1 → XP_038474820.1  5'-nucleotidase domain-containing protein 1 isoform X1

      Conserved Domains (1) summary
      cl21460
      Location:3 → 337
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    2. XM_038618893.1 → XP_038474821.1  5'-nucleotidase domain-containing protein 1 isoform X2

      Conserved Domains (1) summary
      cl21460
      Location:3 → 336
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049233.1 Alternate UU_Cfam_GSD_1.0

      Range
      72254898..72373702
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038555012.1 → XP_038410940.1  LOW QUALITY PROTEIN: 5'-nucleotidase domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0M8I3, A0A8C0S8E5, A0A8I3PAA2
      Conserved Domains (1) summary
      cl21460
      Location:3 → 337
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006594.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      71550833..71670015
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038671746.1 → XP_038527674.1  5'-nucleotidase domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0M8I3, A0A8C0S8E5, A0A8I3PAA2
      Conserved Domains (1) summary
      cl21460
      Location:3 → 337
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    2. XM_038671756.1 → XP_038527684.1  5'-nucleotidase domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0M8I3
      Conserved Domains (1) summary
      cl21460
      Location:3 → 336
      HAD_like; Haloacid Dehalogenase-like Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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