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    GRAMD2B GRAM domain containing 2B [ Canis lupus familiaris (dog) ]

    Gene ID: 474662, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GRAMD2Bprovided by VGNC
    Official Full Name
    GRAM domain containing 2Bprovided by VGNC
    Primary source
    VGNC:VGNC:41469
    See related
    Ensembl:ENSCAFG00845009842
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    GRAMD3
    Orthologs
    human mouse all
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    Genomic context

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    See GRAMD2B in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 11 NC_051815.1 (16398568..16509304)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 11 NC_006593.4 (14466696..14577119)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 11 NC_049232.1 (15572379..15683305)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 11 NC_049271.1 (15130440..15240836)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 11 NC_049752.1 (14977002..15087038)

    Chromosome 11 - NC_051815.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119873876 Neighboring gene uncharacterized LOC111098007 Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC119873877 Neighboring gene aldehyde dehydrogenase 7 family member A1 Neighboring gene phosphorylated adaptor for RNA export

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Assembly of the β4-Integrin Interactome Based on Proximal Biotinylation in the Presence and Absence of Heterodimerization. Myllymäki SM, et al. Mol Cell Proteomics, 2019 Feb. PMID 30404858, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    GRAM domain-containing protein 3; GRAM domain-containing protein 2B
    Names
    GRAM domain containing 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051815.1 Reference ROS_Cfam_1.0

      Range
      16398568..16509304
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038681364.1 → XP_038537292.1  GRAM domain-containing protein 2B isoform X1

      UniProtKB/TrEMBL
      A0A8C0QB51, A0A8I3N3S8, A0A8P0PCK9
      Related
      ENSCAFP00845013560.1, ENSCAFT00845017417.1
      Conserved Domains (1) summary
      cd13220
      Location:136 → 228
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    2. XM_038681367.1 → XP_038537295.1  GRAM domain-containing protein 2B isoform X4

      UniProtKB/TrEMBL
      A0A8I3NEK4, A0A8P0NNG8
      Conserved Domains (1) summary
      cd13220
      Location:104 → 196
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    3. XM_038681365.1 → XP_038537293.1  GRAM domain-containing protein 2B isoform X2

      UniProtKB/TrEMBL
      A0A8C0QE70, A0A8I3NEK4, A0A8I3RVM9, A0A8P0NNG8
      Related
      ENSCAFP00845013909.1, ENSCAFT00845017858.1
      Conserved Domains (1) summary
      cd13220
      Location:130 → 222
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    4. XM_038681366.1 → XP_038537294.1  GRAM domain-containing protein 2B isoform X3

      UniProtKB/TrEMBL
      A0A8I3NCH1, A0A8P0TS65
      Related
      ENSCAFP00845013508.1, ENSCAFT00845017341.1
      Conserved Domains (1) summary
      cd13220
      Location:122 → 214
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    5. XM_038681368.1 → XP_038537296.1  GRAM domain-containing protein 2B isoform X4

      UniProtKB/TrEMBL
      A0A8I3NEK4, A0A8P0NNG8
      Conserved Domains (1) summary
      cd13220
      Location:104 → 196
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049271.1 Alternate UMICH_Zoey_3.1

      Range
      15130440..15240836
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038489941.1 → XP_038345869.1  GRAM domain-containing protein 2B isoform X1

      Conserved Domains (1) summary
      cd13220
      Location:136 → 228
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    2. XM_038489944.1 → XP_038345872.1  GRAM domain-containing protein 2B isoform X4

      Conserved Domains (1) summary
      cd13220
      Location:104 → 196
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    3. XM_038489942.1 → XP_038345870.1  GRAM domain-containing protein 2B isoform X2

      Conserved Domains (1) summary
      cd13220
      Location:130 → 222
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    4. XM_038489943.1 → XP_038345871.1  GRAM domain-containing protein 2B isoform X3

      Conserved Domains (1) summary
      cd13220
      Location:122 → 214
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    5. XM_038489945.1 → XP_038345873.1  GRAM domain-containing protein 2B isoform X4

      Conserved Domains (1) summary
      cd13220
      Location:104 → 196
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049752.1 Alternate UNSW_CanFamBas_1.0

      Range
      14977002..15087038
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038615870.1 → XP_038471798.1  GRAM domain-containing protein 2B isoform X1

    2. XM_038615873.1 → XP_038471801.1  GRAM domain-containing protein 2B isoform X4

      Conserved Domains (1) summary
      cd13220
      Location:104 → 196
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    3. XM_038615871.1 → XP_038471799.1  GRAM domain-containing protein 2B isoform X2

      Conserved Domains (1) summary
      cd13220
      Location:130 → 222
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    4. XM_038615872.1 → XP_038471800.1  GRAM domain-containing protein 2B isoform X3

    5. XM_038615874.1 → XP_038471802.1  GRAM domain-containing protein 2B isoform X4

      Conserved Domains (1) summary
      cd13220
      Location:104 → 196
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049232.1 Alternate UU_Cfam_GSD_1.0

      Range
      15572379..15683305
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038552002.1 → XP_038407930.1  GRAM domain-containing protein 2B isoform X1

      UniProtKB/TrEMBL
      A0A8C0QB51, A0A8I3N3S8, A0A8P0PCK9
      Conserved Domains (1) summary
      cd13220
      Location:136 → 228
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    2. XM_038552005.1 → XP_038407933.1  GRAM domain-containing protein 2B isoform X4

      UniProtKB/TrEMBL
      A0A8I3NEK4, A0A8P0NNG8
      Conserved Domains (1) summary
      cd13220
      Location:104 → 196
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    3. XM_038552003.1 → XP_038407931.1  GRAM domain-containing protein 2B isoform X2

      UniProtKB/TrEMBL
      A0A8C0QE70, A0A8I3NEK4, A0A8I3RVM9, A0A8P0NNG8
      Conserved Domains (1) summary
      cd13220
      Location:130 → 222
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    4. XM_038552004.1 → XP_038407932.1  GRAM domain-containing protein 2B isoform X3

      UniProtKB/TrEMBL
      A0A8I3NCH1, A0A8P0TS65
      Conserved Domains (1) summary
      cd13220
      Location:122 → 214
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    5. XM_038552006.1 → XP_038407934.1  GRAM domain-containing protein 2B isoform X4

      UniProtKB/TrEMBL
      A0A8I3NEK4, A0A8P0NNG8
      Conserved Domains (1) summary
      cd13220
      Location:104 → 196
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006593.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      14466696..14577119
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005626468.4 → XP_005626525.1  GRAM domain-containing protein 2B isoform X1

      UniProtKB/TrEMBL
      A0A8C0QB51, A0A8I3N3S8, A0A8P0PCK9
      Conserved Domains (1) summary
      cd13220
      Location:136 → 228
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    2. XM_038657790.1 → XP_038513718.1  GRAM domain-containing protein 2B isoform X4

      UniProtKB/TrEMBL
      A0A8I3NEK4, A0A8P0NNG8
      Conserved Domains (1) summary
      cd13220
      Location:104 → 196
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    3. XM_038657772.1 → XP_038513700.1  GRAM domain-containing protein 2B isoform X2

      UniProtKB/TrEMBL
      A0A8C0QE70, A0A8I3NEK4, A0A8I3RVM9, A0A8P0NNG8
      Conserved Domains (1) summary
      cd13220
      Location:130 → 222
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    4. XM_531891.7 → XP_531891.3  GRAM domain-containing protein 2B isoform X3

      UniProtKB/TrEMBL
      A0A8I3NCH1, A0A8P0TS65
      Conserved Domains (1) summary
      cd13220
      Location:122 → 214
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain

    5. XM_038657794.1 → XP_038513722.1  GRAM domain-containing protein 2B isoform X4

      UniProtKB/TrEMBL
      A0A8I3NEK4, A0A8P0NNG8
      Conserved Domains (1) summary
      cd13220
      Location:104 → 196
      PH-GRAM_GRAMDC; GRAM domain-containing protein (GRAMDC) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    Nucleotide Protein
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