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    STARD3NL STARD3 N-terminal like [ Pan troglodytes (chimpanzee) ]

    Gene ID: 463358, updated on 10-Oct-2024

    Summary

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    Official Symbol
    STARD3NLprovided by VGNC
    Official Full Name
    STARD3 N-terminal likeprovided by VGNC
    Primary source
    VGNC:VGNC:14092
    Locus tag
    CK820_G0047845
    See related
    Ensembl:ENSPTRG00000019094
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See STARD3NL in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 6 NC_072404.2 (43949294..44005867)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 7 NC_072405.1 (41591656..41646745)

    Chromosome 6 - NC_072404.2Genomic Context describing neighboring genes Neighboring gene secreted frizzled related protein 4 Neighboring gene ependymin related 1 Neighboring gene uncharacterized LOC129144549 Neighboring gene T cell receptor gamma constant 1-like Neighboring gene T-cell receptor gamma alternate reading frame protein Neighboring gene T cell receptor gamma constant 1 Neighboring gene coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cholesterol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cholesterol transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle tethering to endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum-endosome membrane contact site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in late endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    MLN64 N-terminal domain homolog; STARD3 N-terminal-like protein
    Names
    MLN64 N-terminal homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072404.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      43949294..44005867
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_519050.8 → XP_519050.1  STARD3 N-terminal-like protein isoform X1

      See identical proteins and their annotated locations for XP_519050.1

      UniProtKB/TrEMBL
      A0A2J8PZ62, A0A2J8PZ75, A0A6D2XBI4, H2QUG2
      Conserved Domains (1) summary
      pfam10457
      Location:49 → 212
      MENTAL; Cholesterol-capturing domain

    2. XM_009452914.5 → XP_009451189.1  STARD3 N-terminal-like protein isoform X2

      See identical proteins and their annotated locations for XP_009451189.1

      UniProtKB/TrEMBL
      A0A2I3RQ00, A0A2I3RYR3, A0A2J8PZ61, A0A6D2X9X0
      Conserved Domains (1) summary
      pfam10457
      Location:49 → 194
      MENTAL; Cholesterol-capturing domain

    3. XM_009452911.5 → XP_009451186.1  STARD3 N-terminal-like protein isoform X1

      See identical proteins and their annotated locations for XP_009451186.1

      UniProtKB/TrEMBL
      A0A2J8PZ62, A0A2J8PZ75, A0A6D2XBI4, H2QUG2
      Related
      ENSPTRP00000032618.5
      Conserved Domains (1) summary
      pfam10457
      Location:49 → 212
      MENTAL; Cholesterol-capturing domain

    4. XM_016957285.4 → XP_016812774.1  STARD3 N-terminal-like protein isoform X2

      UniProtKB/TrEMBL
      A0A2I3RQ00, A0A2I3RYR3, A0A2J8PZ61, A0A6D2X9X0
      Related
      ENSPTRP00000069472.1
      Conserved Domains (1) summary
      pfam10457
      Location:49 → 194
      MENTAL; Cholesterol-capturing domain

    5. XM_054687479.2 → XP_054543454.1  STARD3 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2J8PZ62, A0A6D2XBI4, H2QUG2

    6. XM_054687481.2 → XP_054543456.1  STARD3 N-terminal-like protein isoform X2

      UniProtKB/TrEMBL
      A0A2I3RYR3, A0A2J8PZ61, A0A6D2X9X0

    7. XM_054687482.2 → XP_054543457.1  STARD3 N-terminal-like protein isoform X2

      UniProtKB/TrEMBL
      A0A2I3RYR3, A0A2J8PZ61, A0A6D2X9X0

    8. XM_063815325.1 → XP_063671395.1  STARD3 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2J8PZ62, A0A6D2XBI4, H2QUG2

    9. XM_054687480.2 → XP_054543455.1  STARD3 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2J8PZ62, A0A6D2XBI4, H2QUG2

    10. XM_063815324.1 → XP_063671394.1  STARD3 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2J8PZ62, A0A6D2XBI4, H2QUG2

    11. XM_063815331.1 → XP_063671401.1  STARD3 N-terminal-like protein isoform X2

      UniProtKB/TrEMBL
      A0A2I3RYR3, A0A2J8PZ61, A0A6D2X9X0

    12. XM_016957284.4 → XP_016812773.1  STARD3 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2J8PZ62, A0A2J8PZ75, A0A6D2XBI4, H2QUG2
      Conserved Domains (1) summary
      pfam10457
      Location:49 → 212
      MENTAL; Cholesterol-capturing domain

    13. XM_054687483.2 → XP_054543458.1  STARD3 N-terminal-like protein isoform X2

      UniProtKB/TrEMBL
      A0A2I3RYR3, A0A2J8PZ61, A0A6D2X9X0

    14. XM_063815327.1 → XP_063671397.1  STARD3 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2J8PZ62, A0A6D2XBI4, H2QUG2

    15. XM_063815330.1 → XP_063671400.1  STARD3 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2J8PZ62, A0A6D2XBI4, H2QUG2

    16. XM_063815326.1 → XP_063671396.1  STARD3 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2J8PZ62, A0A6D2XBI4, H2QUG2

    17. XM_063815332.1 → XP_063671402.1  STARD3 N-terminal-like protein isoform X2

      UniProtKB/TrEMBL
      A0A2I3RYR3, A0A2J8PZ61, A0A6D2X9X0

    18. XM_063815328.1 → XP_063671398.1  STARD3 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2J8PZ62, A0A6D2XBI4, H2QUG2

    19. XM_063815333.1 → XP_063671403.1  STARD3 N-terminal-like protein isoform X2

      UniProtKB/TrEMBL
      A0A2I3RYR3, A0A2J8PZ61, A0A6D2X9X0

    20. XM_063815329.1 → XP_063671399.1  STARD3 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A2J8PZ62, A0A6D2XBI4, H2QUG2
    Nucleotide Protein
    Heading Accession and Version

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