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    ZNF827 zinc finger protein 827 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 461664, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZNF827provided by VGNC
    Official Full Name
    zinc finger protein 827provided by VGNC
    Primary source
    VGNC:VGNC:48926
    Locus tag
    CK820_G0016852
    See related
    Ensembl:ENSPTRG00000016487
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 3 NC_072401.2 (147546925..147727744, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 4 NC_072402.1 (147506338..147687222, complement)

    Chromosome 3 - NC_072401.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107974119 Neighboring gene nuclear receptor coactivator 4-like Neighboring gene metabolism of cobalamin associated A Neighboring gene chromosome 4 C4orf51 homolog Neighboring gene uncharacterized LOC134809921 Neighboring gene uncharacterized LOC107974435

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 827

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072401.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      147546925..147727744 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016952308.4 → XP_016807797.1  zinc finger protein 827 isoform X1

    2. XM_016952315.3 → XP_016807804.1  zinc finger protein 827 isoform X8

      UniProtKB/TrEMBL
      A0A2J8MUC5, K7CZX4
      Conserved Domains (3) summary
      COG5048
      Location:354 → 442
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:375 → 395
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:818 → 838
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_016952316.3 → XP_016807805.1  zinc finger protein 827 isoform X9

      UniProtKB/TrEMBL
      A0A2I3SF29, A0A2J8MUA8, A0A6D2X5K7, K7CZX4
      Related
      ENSPTRP00000075097.1
      Conserved Domains (3) summary
      COG5048
      Location:354 → 442
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:375 → 395
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:818 → 838
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_054683416.2 → XP_054539391.1  zinc finger protein 827 isoform X2

      UniProtKB/TrEMBL
      A0A2J8MUC1

    5. XM_063809930.1 → XP_063666000.1  zinc finger protein 827 isoform X4

    6. XM_054683417.2 → XP_054539392.1  zinc finger protein 827 isoform X3

      UniProtKB/TrEMBL
      A0A2J8MUC6

    7. XM_016952314.4 → XP_016807803.1  zinc finger protein 827 isoform X6

      UniProtKB/TrEMBL
      K7CZX4

    8. XM_063809932.1 → XP_063666002.1  zinc finger protein 827 isoform X7

      UniProtKB/TrEMBL
      K7CZX4

    9. XM_016952319.4 → XP_016807808.1  zinc finger protein 827 isoform X9

      UniProtKB/TrEMBL
      A0A2I3SF29, A0A2J8MUA8, A0A6D2X5K7, K7CZX4
      Related
      ENSPTRP00000028300.5
      Conserved Domains (3) summary
      COG5048
      Location:354 → 442
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:375 → 395
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:818 → 838
      ZF_C2H2; C2H2 Zn finger [structural motif]

    10. XM_016952318.4 → XP_016807807.1  zinc finger protein 827 isoform X9

      UniProtKB/TrEMBL
      A0A2I3SF29, A0A2J8MUA8, A0A6D2X5K7, K7CZX4
      Conserved Domains (3) summary
      COG5048
      Location:354 → 442
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:375 → 395
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:818 → 838
      ZF_C2H2; C2H2 Zn finger [structural motif]

    11. XM_016952317.4 → XP_016807806.1  zinc finger protein 827 isoform X9

      UniProtKB/TrEMBL
      A0A2I3SF29, A0A2J8MUA8, A0A6D2X5K7, K7CZX4
      Conserved Domains (3) summary
      COG5048
      Location:354 → 442
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:375 → 395
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:818 → 838
      ZF_C2H2; C2H2 Zn finger [structural motif]

    12. XM_063809931.1 → XP_063666001.1  zinc finger protein 827 isoform X5

      UniProtKB/TrEMBL
      K7CZX4

    RNA

    1. XR_010156713.1 RNA Sequence

    2. XR_010156714.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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