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    KRBOX5 KRAB box domain containing 5 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 454076, updated on 10-Oct-2024

    Summary

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    Official Symbol
    KRBOX5provided by VGNC
    Official Full Name
    KRAB box domain containing 5provided by VGNC
    Primary source
    VGNC:VGNC:13821
    Locus tag
    CK820_G0050619
    See related
    Ensembl:ENSPTRG00000008053
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Also known as
    ZNF720
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    Genomic context

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    See KRBOX5 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 18 NC_072416.2 (35835347..35885057)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 16 NC_072414.1 (35822557..35924355)

    Chromosome 18 - NC_072416.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134808803 Neighboring gene clustered mitochondria protein homolog Neighboring gene uncharacterized LOC134808804 Neighboring gene vomeronasal 1 receptor panTroV1R-ps254 pseudogene Neighboring gene serine/threonine-protein phosphatase 2A catalytic subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    KRAB domain-containing protein 5; zinc finger protein 267; zinc finger protein 724
    Names
    zinc finger protein 720

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072416.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      35835347..35885057
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063797794.1 → XP_063653864.1  KRAB domain-containing protein 5 isoform X6

    2. XM_016929760.4 → XP_016785249.2  zinc finger protein 267 isoform X1

    3. XM_003315079.5 → XP_003315127.1  KRAB domain-containing protein 5 isoform X7

      See identical proteins and their annotated locations for XP_003315127.1

      UniProtKB/TrEMBL
      A0A2J8J593, A0A2J8J5A1, A0A6D2WGF2, K7C801
      Related
      ENSPTRP00000092754.1
      Conserved Domains (1) summary
      smart00349
      Location:4 → 64
      KRAB; krueppel associated box

    4. XM_063797788.1 → XP_063653858.1  zinc finger protein 267 isoform X2

    5. XM_063797796.1 → XP_063653866.1  KRAB domain-containing protein 5 isoform X8

    6. XM_063797790.1 → XP_063653860.1  zinc finger protein 724 isoform X3

    7. XM_063797793.1 → XP_063653863.1  zinc finger protein 724 isoform X5

    8. XM_063797789.1 → XP_063653859.1  zinc finger protein 724 isoform X3

    9. XM_063797795.1 → XP_063653865.1  KRAB domain-containing protein 5 isoform X8

    10. XM_063797791.1 → XP_063653861.1  zinc finger protein 724 isoform X3

    11. XM_063797792.1 → XP_063653862.1  zinc finger protein 724 isoform X4

    RNA

    1. XR_010152587.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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