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    SELPLG selectin P ligand [ Pan troglodytes (chimpanzee) ]

    Gene ID: 452211, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SELPLGprovided by VGNC
    Official Full Name
    selectin P ligandprovided by VGNC
    Primary source
    VGNC:VGNC:13443
    Locus tag
    CK820_G0015983
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See SELPLG in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 10 NC_072408.2 (115435749..115446691, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 12 NC_072410.1 (114058004..114070357, complement)

    Chromosome 10 - NC_072408.2Genomic Context describing neighboring genes Neighboring gene spliceosome associated factor 3, U4/U6 recycling protein Neighboring gene iron-sulfur cluster assembly enzyme Neighboring gene transmembrane protein 119 Neighboring gene uncharacterized LOC107967634 Neighboring gene coronin 1C Neighboring gene U7 small nuclear RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in leukocyte tethering or rolling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    P-selectin glycoprotein ligand 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072408.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      115435749..115446691 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016924121.4 → XP_016779610.1  P-selectin glycoprotein ligand 1

      UniProtKB/TrEMBL
      A0A2J8MZF1, A0A2J8MZF4
      Conserved Domains (1) summary
      cl26557
      Location:120 → 268
      RNase_E_G; Ribonuclease E/G family
    Nucleotide Protein
    Heading Accession and Version

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