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    AP3B1 adaptor related protein complex 3 beta 1 subunit [ Gallus gallus (chicken) ]

    Gene ID: 427646, updated on 10-Oct-2024

    Summary

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    Symbol
    AP3B1provided by CGNC
    Full Name
    adaptor related protein complex 3 beta 1 subunitprovided by CGNC
    Primary source
    CGNC:3233
    See related
    Ensembl:ENSGALG00010012751
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See AP3B1 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (23329515..23491712)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (23329515..23491712)

    Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121108558 Neighboring gene uncharacterized LOC121108557 Neighboring gene tubulin folding cofactor A Neighboring gene orthopedia homeobox

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in anterograde synaptic vesicle transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of AP-3 adaptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of clathrin adaptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of membrane coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AP-3 complex subunit beta-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      23329515..23491712
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003642955.6 → XP_003643003.2  AP-3 complex subunit beta-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YAI9, A0A8V0YGX3
      Related
      ENSGALP00010017773.1, ENSGALT00010030656.1
      Conserved Domains (2) summary
      COG5096
      Location:52 → 606
      COG5096; Vesicle coat complex, various subunits [Intracellular trafficking, secretion, and vesicular transport]
      sd00044
      Location:117 → 145
      HEAT; HEAT repeat [structural motif]

    2. XM_015277631.4 → XP_015133117.2  AP-3 complex subunit beta-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YAI9, A0A8V0YIV3
      Related
      ENSGALP00010017737.1, ENSGALT00010030571.1

    3. XM_015277632.4 → XP_015133118.3  AP-3 complex subunit beta-1 isoform X3

      Related
      ENSGALP00010017717.1, ENSGALT00010030543.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      23329515..23491712
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046936481.1 → XP_046792437.1  AP-3 complex subunit beta-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YGX3

    2. XM_046936480.1 → XP_046792436.1  AP-3 complex subunit beta-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YIV3

    3. XM_046936482.1 → XP_046792438.1  AP-3 complex subunit beta-1 isoform X3

    Nucleotide Protein
    Heading Accession and Version

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